RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 KRT19P08727 400 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 POLR2BP30876 1174 aaKnown RBP18.05■□□□□ 0.48
UBE3D-208ENST00000626828 HOXA9P31269 272 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 THEM5Q8N1Q8 247 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 PLCD3Q8N3E9 789 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 OR5B17Q8NGF7 314 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 CXorf38Q8TB03 319 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 SPATA20Q8TB22 786 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 SMARCE1Q969G3 411 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 CCDC127Q96BQ5 260 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 ZNF707Q96C28 371 aaPredicted RBP18.05■□□□□ 0.48
UBE3D-208ENST00000626828 MAPK8IP1Q9UQF2 711 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 USTQ9Y2C2 406 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 WDR27A2RRH5 827 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 XYLBO75191 536 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 NR3C1P04150 777 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 DLATP10515 647 aaKnown RBP18.04■□□□□ 0.48
UBE3D-208ENST00000626828 ALADP13716 330 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 RPL13P26373 211 aaKnown RBP18.04■□□□□ 0.48
UBE3D-208ENST00000626828 UBE2HP62256 183 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 MYO1EQ12965 1108 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 NFIL3Q16649 462 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 LMBRD2Q68DH5 695 aaPredicted RBP18.04■□□□□ 0.48
UBE3D-208ENST00000626828 TRAPPC11Q7Z392 1133 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 TCEAL8Q8IYN2 117 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 MTMR12Q9C0I1 747 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 WDR6Q9NNW5 1121 aaKnown RBP18.04■□□□□ 0.48
UBE3D-208ENST00000626828 AFF4Q9UHB7 1163 aaKnown RBP18.04■□□□□ 0.48
UBE3D-208ENST00000626828 FRMD4BQ9Y2L6 1034 aa18.04■□□□□ 0.48
UBE3D-208ENST00000626828 C5orf42Q9H799 3197 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 PI4K2BG5E9Z4 385 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 HUS1O60921 280 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 CPB1P15086 417 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 AP3M2P53677 418 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 GPR17Q13304 367 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 ZNF658Q5TYW1 1059 aaPredicted RBP18.03■□□□□ 0.48
UBE3D-208ENST00000626828 OTOP3Q7RTS5 596 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 RNF135Q8IUD6 432 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 SLC7A14Q8TBB6 771 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 ACSF2Q96CM8 615 aaPredicted RBP18.03■□□□□ 0.48
UBE3D-208ENST00000626828 CGRRF1Q99675 332 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 CYP4F11Q9HBI6 524 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 GDAP2Q9NXN4 497 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 SIX4Q9UIU6 781 aa18.03■□□□□ 0.48
UBE3D-208ENST00000626828 C2orf16Q68DN1 1984 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 PRRG1O14668 218 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 MAPK13O15264 365 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 POU2F2P09086 479 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 BFSP1Q12934 665 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 ADAM9Q13443 819 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 COBLL1Q53SF7 1204 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 WSCD1Q658N2 575 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 DPH6Q7L8W6 267 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 FEZF2Q8TBJ5 459 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 PARD3BQ8TEW8 1205 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 HPDLQ96IR7 371 aa18.02■□□□□ 0.48
UBE3D-208ENST00000626828 PTPRJQ12913 1337 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 SEC24AO95486 1093 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 CST3P01034 146 aaPredicted RBP18.01■□□□□ 0.47
UBE3D-208ENST00000626828 PRCPP42785 496 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 CASP4P49662 377 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 CLDN10P78369 228 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 ADCY1Q08828 1119 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 CEP135Q66GS9 1140 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 RNF19BQ6ZMZ0 732 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 ZDHHC14Q8IZN3 488 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 TMEM86AQ8N2M4 240 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 SPATA18Q8TC71 538 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 TMC2Q8TDI7 906 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 ZNF516Q92618 1163 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 ERCC4Q92889 916 aaPredicted RBP18.01■□□□□ 0.47
UBE3D-208ENST00000626828 FAM84AQ96KN4 292 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.01■□□□□ 0.47
UBE3D-208ENST00000626828 POLIQ9UNA4 740 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 SNX9Q9Y5X1 595 aa18.01■□□□□ 0.47
UBE3D-208ENST00000626828 C2CD4DB7Z1M9 353 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 IKBKBO14920 756 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 CCL16O15467 120 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 DCXO43602 365 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 PHACTR2O75167 634 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 LRG1P02750 347 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 PTPN2P17706 415 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 SP100P23497 879 aaPredicted RBP18■□□□□ 0.47
UBE3D-208ENST00000626828 NR2F2P24468 414 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 SMARCB1Q12824 385 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 TRPC3Q13507 836 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 EDRF1Q3B7T1 1238 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 SCARA3Q6AZY7 606 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 CENPPQ6IPU0 288 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 CLEC17AQ6ZS10 378 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 GRASPQ7Z6J2 395 aaPredicted RBP18■□□□□ 0.47
UBE3D-208ENST00000626828 SMYD4Q8IYR2 804 aaPredicted RBP18■□□□□ 0.47
UBE3D-208ENST00000626828 TOP6BLQ8N6T0 577 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 TDRD5Q8NAT2 981 aaKnown RBP18■□□□□ 0.47
UBE3D-208ENST00000626828 KHSRPQ92945 711 aaKnown RBP eCLIP18■□□□□ 0.47
UBE3D-208ENST00000626828 EPHX3Q9H6B9 360 aa18■□□□□ 0.47
UBE3D-208ENST00000626828 CLUHO75153 1309 aa17.99■□□□□ 0.47
UBE3D-208ENST00000626828 FAM163BP0C2L3 166 aa17.99■□□□□ 0.47
UBE3D-208ENST00000626828 OR4Q2P0C623 313 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms