RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 UNC93AQ86WB7 457 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 ACRBPQ8NEB7 543 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 SEPT8Q92599 483 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 VCPIP1Q96JH7 1222 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 ZNF560Q96MR9 790 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 UROC1Q96N76 676 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 DESI2Q9BSY9 194 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 ZNF518BQ9C0D4 1074 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 RSAD1Q9HA92 442 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 TMEM161AQ9NX61 479 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 TRMT1Q9NXH9 659 aaKnown RBP12.58□□□□□ -0.4
LINC00963-220ENST00000625171 RTN2O75298 545 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 CILPO75339 1184 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 CYP1A1P04798 512 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-220ENST00000625171 KRT19P08727 400 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 AARSP49588 968 aaKnown RBP eCLIP12.57□□□□□ -0.41e-6■■■■■ 52.5
LINC00963-220ENST00000625171 HADHBP55084 474 aaKnown RBP12.57□□□□□ -0.4
LINC00963-220ENST00000625171 FMO1Q01740 532 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 CYP27A1Q02318 531 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 GRIK3Q13003 919 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 SV2CQ496J9 727 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 ARHGAP29Q52LW3 1261 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 NOP9Q86U38 636 aaKnown RBP12.57□□□□□ -0.4
LINC00963-220ENST00000625171 SLC47A2Q86VL8 602 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 C17orf53Q8N3J3 647 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-220ENST00000625171 LNX1Q8TBB1 728 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-220ENST00000625171 FAM84AQ96KN4 292 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 ARID3AQ99856 593 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 LACRTQ9GZZ8 138 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 CXCL16Q9H2A7 254 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 HIPK3Q9H422 1215 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 BARX2Q9UMQ3 279 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-220ENST00000625171 PCDHGC3Q9UN70 934 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 PCDHB4Q9Y5E5 795 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 UMODL1Q5DID0 1318 aa12.57□□□□□ -0.4
LINC00963-220ENST00000625171 ANKRD62A6NC57 917 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 KPNA7A9QM74 516 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 KIAA0355O15063 1070 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 LSM8O95777 96 aaKnown RBP12.56□□□□□ -0.4
LINC00963-220ENST00000625171 H2AFZP0C0S5 128 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 TMEM253P0C7T8 217 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 PNMA6AP0CW24 399 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-220ENST00000625171 UNGP13051 313 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-220ENST00000625171 CDH5P33151 784 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-220ENST00000625171 TAF6P49848 677 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 LILRA4P59901 499 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 TNNC1P63316 161 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 SOX4Q06945 474 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-220ENST00000625171 STILQ15468 1287 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 TRIM60Q495X7 471 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 TMEM270Q6UE05 265 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 H2AFVQ71UI9 128 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 GLYCTKQ8IVS8 523 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 TOP6BLQ8N6T0 577 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 RBBP8NLQ8NC74 664 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-220ENST00000625171 DBF4BQ8NFT6 615 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 WHAMMQ8TF30 809 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 C18orf25Q96B23 403 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-220ENST00000625171 RPS6KC1Q96S38 1066 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 GAD1Q99259 594 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00963-220ENST00000625171 DNAI2Q9GZS0 605 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 LHX5Q9H2C1 402 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 MIOSQ9NXC5 875 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 TUBGCP4Q9UGJ1 667 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 PAXBP1Q9Y5B6 917 aa12.56□□□□□ -0.4
LINC00963-220ENST00000625171 PDCD11Q14690 1871 aaKnown RBP12.55□□□□□ -0.4
LINC00963-220ENST00000625171 RCCD1A6NED2 376 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 TMEM189-UBE2V1I3L0A0 370 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 HOXA2O43364 376 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 KIF5CO60282 957 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 PQBP1O60828 265 aaKnown RBP12.55□□□□□ -0.4
LINC00963-220ENST00000625171 PFKMP08237 780 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 CLTBP09497 229 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 TNNT1P13805 278 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 MLH1P40692 756 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 USP8P40818 1118 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 RAD23BP54727 409 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 DSC1Q08554 894 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 TUSC3Q13454 348 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 CNGA2Q16280 664 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 UPP1Q16831 310 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 ACAD10Q6JQN1 1059 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 KIAA1328Q86T90 577 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 RPUSD2Q8IZ73 545 aaKnown RBP12.55□□□□□ -0.4
LINC00963-220ENST00000625171 TMEM86AQ8N2M4 240 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 ZNF606Q8WXB4 792 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 LINC01599Q8WXQ3 324 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 TMEM176AQ96HP8 235 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 APOL6Q9BWW8 343 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 WNT8AQ9H1J5 351 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 KLK14Q9P0G3 267 aa12.55□□□□□ -0.4
LINC00963-220ENST00000625171 NXF1Q9UBU9 619 aaKnown RBP12.55□□□□□ -0.4
LINC00963-220ENST00000625171 ARHGEF37A1IGU5 675 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 MEIS3P2A8K0S8 358 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 GABRDO14764 452 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 MED7O43513 233 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms