RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CETN2P41208 172 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 PIK3CAP42336 1068 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 SERPINB4P48594 390 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 PTP4A2Q12974 167 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 CCDC142Q17RM4 750 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 CERKLQ49MI3 558 aaPredicted RBP14.91□□□□□ -0.02
LDB3-209ENST00000623056 PRR5LQ6MZQ0 368 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 C12orf56Q8IXR9 622 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 SCYL3Q8IZE3 742 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 MCOLN2Q8IZK6 566 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 VPS52Q8N1B4 723 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 ZNF276Q8N554 614 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 EZH1Q92800 747 aaPredicted RBP14.91□□□□□ -0.02
LDB3-209ENST00000623056 MKL1Q969V6 931 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 PRR11Q96HE9 360 aaPredicted RBP14.91□□□□□ -0.02
LDB3-209ENST00000623056 GBP5Q96PP8 586 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 ACCSQ96QU6 501 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 ZNF184Q99676 751 aaPredicted RBP14.91□□□□□ -0.02
LDB3-209ENST00000623056 FAM192AQ9GZU8 254 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 TMEM206Q9H813 350 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 PDP2Q9P2J9 529 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 ZNF212Q9UDV6 495 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 SLC24A2Q9UI40 661 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 UBR3Q6ZT12 1888 aa14.9□□□□□ -0.02
LDB3-209ENST00000623056 ADRB2P07550 413 aa14.9□□□□□ -0.02
LDB3-209ENST00000623056 ZSCAN5DPP0CG00 497 aa14.9□□□□□ -0.02
LDB3-209ENST00000623056 IKQ13123 557 aaPredicted RBP14.9□□□□□ -0.02
LDB3-209ENST00000623056 ARHGAP22Q7Z5H3 698 aa14.9□□□□□ -0.02
LDB3-209ENST00000623056 ELMO3Q96BJ8 720 aa14.9□□□□□ -0.02
LDB3-209ENST00000623056 SSU72Q9NP77 194 aaKnown RBP14.9□□□□□ -0.02
LDB3-209ENST00000623056 AVENQ9NQS1 362 aaPredicted RBP14.9□□□□□ -0.02
LDB3-209ENST00000623056 GOLGA8IPA6NC78 632 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 GOLGA8JA6NMD2 632 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 PROSCO94903 275 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 UBTFL6P0CB48 400 aaPredicted RBP14.89□□□□□ -0.03
LDB3-209ENST00000623056 TAS2R40P59535 323 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 GTF2IP78347 998 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 DYNC1I2Q13409 638 aaKnown RBP14.89□□□□□ -0.03
LDB3-209ENST00000623056 WDR72Q3MJ13 1102 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 C2CD6Q53TS8 623 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 ZBED8Q8IZ13 594 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 B4GALNT2Q8NHY0 566 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 TMEM174Q8WUU8 243 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 PTPRN2Q92932 1015 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 CCDC17Q96LX7 622 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 LXNQ9BS40 222 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 TRIM55Q9BYV6 548 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 UNC45AQ9H3U1 944 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 FBXO6Q9NRD1 293 aaPredicted RBP14.89□□□□□ -0.03
LDB3-209ENST00000623056 IRAK4Q9NWZ3 460 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 TAS2R1Q9NYW7 299 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 WASF2Q9Y6W5 498 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 RBBP6Q7Z6E9 1792 aaKnown RBP14.89□□□□□ -0.03
LDB3-209ENST00000623056 UMODL1Q5DID0 1318 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 UNGP13051 313 aaPredicted RBP14.89□□□□□ -0.03
LDB3-209ENST00000623056 CD58P19256 250 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 SERPINB3P29508 390 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 THOC5Q13769 683 aaKnown RBP14.89□□□□□ -0.03
LDB3-209ENST00000623056 RASA2Q15283 850 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 GSTA3Q16772 222 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 CPA5Q8WXQ8 436 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 SKA1Q96BD8 255 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 FAM81BQ96LP2 452 aa14.89□□□□□ -0.03
LDB3-209ENST00000623056 C12orf65Q9H3J6 166 aaKnown RBP14.89□□□□□ -0.03
LDB3-209ENST00000623056 MMADHCQ9H3L0 296 aaPredicted RBP14.89□□□□□ -0.03
LDB3-209ENST00000623056 ALOX15BO15296 676 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 PSTPIP1O43586 416 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 DNAJC6O75061 913 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 ZBED4O75132 1171 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 KRT5P13647 590 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 ETS1P14921 441 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 GJC1P36383 396 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 ARFIP2P53365 341 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 ZBTB16Q05516 673 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 SEPT7Q16181 437 aaKnown RBP14.88□□□□□ -0.03
LDB3-209ENST00000623056 TBC1D25Q3MII6 688 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 SLC27A3Q5K4L6 730 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 PADI6Q6TGC4 694 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 SESTD1Q86VW0 696 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 RHOT1Q8IXI2 618 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 KATNAL2Q8IYT4 538 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 PDCD7Q8N8D1 485 aaKnown RBP14.88□□□□□ -0.03
LDB3-209ENST00000623056 AZIN2Q96A70 460 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 CCDC127Q96BQ5 260 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 NT5C1BQ96P26 610 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 MANSC1Q9H8J5 431 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 PPCSQ9HAB8 311 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 NYAP2Q9P242 653 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 DNPEPQ9ULA0 475 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 LIASO43766 372 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 GSTT1P30711 240 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 GPC3P51654 580 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 ARSEP51690 589 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 NEK3P51956 506 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 CDK16Q00536 496 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 GPS1Q13098 491 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 EFHC2Q5JST6 749 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 KRT39Q6A163 491 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 LRRC6Q86X45 466 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms