RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PAFAH1B1P43034 410 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 TUBB4BP68371 445 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 PTK7Q13308 1070 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 PPP1R2P3Q6NXS1 205 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 MCOLN2Q8IZK6 566 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 SMG8Q8ND04 991 aaKnown RBP22.87■■□□□ 1.25
SPAST-204ENST00000621856 RABGGTAQ92696 567 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 RPGRIP1Q96KN7 1286 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 RNF19AQ9NV58 838 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 TRIM17Q9Y577 477 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 PTCH2Q9Y6C5 1203 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 FRMPD3Q5JV73 1810 aa22.87■■□□□ 1.25
SPAST-204ENST00000621856 TMEM110-MUSTN1A8MSY1 372 aa22.86■■□□□ 1.25
SPAST-204ENST00000621856 PDE2AO00408 941 aaPredicted RBP22.86■■□□□ 1.25
SPAST-204ENST00000621856 GPR182O15218 404 aa22.86■■□□□ 1.25
SPAST-204ENST00000621856 MTA2O94776 668 aa22.86■■□□□ 1.25
SPAST-204ENST00000621856 MYBL1P10243 752 aa22.86■■□□□ 1.25
SPAST-204ENST00000621856 CD19P15391 556 aa22.86■■□□□ 1.25
SPAST-204ENST00000621856 NT5DC3Q86UY8 548 aa22.86■■□□□ 1.25
SPAST-204ENST00000621856 ZNF564Q8TBZ8 553 aaPredicted RBP22.86■■□□□ 1.25
SPAST-204ENST00000621856 TSPAN18Q96SJ8 248 aa22.86■■□□□ 1.25
SPAST-204ENST00000621856 TSEN34Q9BSV6 310 aaKnown RBP22.86■■□□□ 1.25
SPAST-204ENST00000621856 TRMT13Q9NUP7 481 aaKnown RBP22.86■■□□□ 1.25
SPAST-204ENST00000621856 UVRAGQ9P2Y5 699 aa22.86■■□□□ 1.25
SPAST-204ENST00000621856 STXBP5LQ9Y2K9 1186 aa22.86■■□□□ 1.25
SPAST-204ENST00000621856 KCNK3O14649 394 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 LIN9Q5TKA1 542 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 LHX8Q68G74 356 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 ABCB6Q9NP58 842 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 CHST12Q9NRB3 414 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 SMIM28A0A1B0GU29 152 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 CD4P01730 458 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 PAEPP09466 180 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 KCNE1P15382 129 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 RBM10P98175 930 aaKnown RBP22.85■■□□□ 1.25
SPAST-204ENST00000621856 C11orf63Q6NUN7 778 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 HACE1Q8IYU2 909 aa22.85■■□□□ 1.25
SPAST-204ENST00000621856 AVENQ9NQS1 362 aaPredicted RBP22.85■■□□□ 1.25
SPAST-204ENST00000621856 MED7O43513 233 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 CILPO75339 1184 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 LSM8O95777 96 aaKnown RBP22.84■■□□□ 1.25
SPAST-204ENST00000621856 ATF7P17544 494 aaPredicted RBP22.84■■□□□ 1.25
SPAST-204ENST00000621856 RAD23BP54727 409 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 MESDQ14696 234 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 CFAP221Q4G0U5 840 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 XKR4Q5GH76 650 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 MON1BQ7L1V2 547 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 TTC39CQ8N584 583 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 GPR161Q8N6U8 529 aaKnown RBP22.84■■□□□ 1.25
SPAST-204ENST00000621856 LRRC52Q8N7C0 313 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 TFAP2BQ92481 460 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 C11orf70Q9BRQ4 267 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 FAM105AQ9NUU6 356 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 ADAM22Q9P0K1 906 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 RNF14Q9UBS8 474 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 CEP83Q9Y592 693 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 SCN1AP35498 2009 aa22.84■■□□□ 1.25
SPAST-204ENST00000621856 PPEF2O14830 753 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 GHRP10912 638 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 ZSCAN20P17040 1043 aaPredicted RBP22.83■■□□□ 1.25
SPAST-204ENST00000621856 PAK2Q13177 524 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 ORC1Q13415 861 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 FBXO47Q5MNV8 452 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 C9orf57Q5W0N0 161 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 PHF13Q86YI8 300 aaPredicted RBP22.83■■□□□ 1.25
SPAST-204ENST00000621856 TMEM35BQ8NCS4 154 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 ARRDC4Q8NCT1 418 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 MS4A14Q96JA4 679 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 PBKQ96KB5 322 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 ZSWIM1Q9BR11 485 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 ELOVL4Q9GZR5 314 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 AGO3Q9H9G7 860 aaKnown RBP22.83■■□□□ 1.25
SPAST-204ENST00000621856 ERVK-5Q9HDB9 667 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 EHD2Q9NZN4 543 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 PCDHGC3Q9UN70 934 aa22.83■■□□□ 1.25
SPAST-204ENST00000621856 CES2O00748 559 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 ITGA4P13612 1032 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 RRM1P23921 792 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 CD52P31358 61 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 PHLDB2Q86SQ0 1253 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 SLC4A11Q8NBS3 891 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 NOA1Q8NC60 698 aaKnown RBP22.82■■□□□ 1.24
SPAST-204ENST00000621856 WHAMMQ8TF30 809 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 TMEM176AQ96HP8 235 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 HES6Q96HZ4 224 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 VCPIP1Q96JH7 1222 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 SELENOOQ9BVL4 669 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 EPC1Q9H2F5 836 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 FAM124BQ9H5Z6 455 aaPredicted RBP22.82■■□□□ 1.24
SPAST-204ENST00000621856 SMARCAL1Q9NZC9 954 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 HMGXB4Q9UGU5 601 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 BARX2Q9UMQ3 279 aaPredicted RBP22.82■■□□□ 1.24
SPAST-204ENST00000621856 SNX9Q9Y5X1 595 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 A0A1W2PQ45 241 aaPredicted RBP22.82■■□□□ 1.24
SPAST-204ENST00000621856 A0A1W2PQY0 241 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 C1QBPQ07021 282 aaKnown RBP22.82■■□□□ 1.24
SPAST-204ENST00000621856 C2orf54Q08AI8 447 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 TRIM71Q2Q1W2 868 aaKnown RBP22.82■■□□□ 1.24
SPAST-204ENST00000621856 C2CD6Q53TS8 623 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 MMS22LQ6ZRQ5 1243 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms