RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 MRPL10Q7Z7H8 261 aaKnown RBP17.01■□□□□ 0.31
CBWD3-216ENST00000621396 PHLDB2Q86SQ0 1253 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 VPS36Q86VN1 386 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 LPIN3Q9BQK8 851 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 SQORQ9Y6N5 450 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 ANO9A1A5B4 782 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 PIRO00625 290 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 KIF5AQ12840 1032 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 ZNF569Q5MCW4 686 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 HACE1Q8IYU2 909 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 UBR7Q8N806 425 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 MRPL45Q9BRJ2 306 aaKnown RBP17■□□□□ 0.31
CBWD3-216ENST00000621396 BCO2Q9BYV7 579 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 TSPYL2Q9H2G4 693 aaPredicted RBP17■□□□□ 0.31
CBWD3-216ENST00000621396 GIT1Q9Y2X7 761 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 I3L4J1 428 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 CCP110O43303 1012 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 THAP12O43422 761 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 B4GALT3O60512 393 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 ATICP31939 592 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 PTPROQ16827 1216 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 ZNF598Q86UK7 904 aaKnown RBP17■□□□□ 0.31
CBWD3-216ENST00000621396 WHAMMQ8TF30 809 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 CPA5Q8WXQ8 436 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 TFAP2BQ92481 460 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 TRAIPQ9BWF2 469 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 DAAM1Q9Y4D1 1078 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 NME7Q9Y5B8 376 aa17■□□□□ 0.31
CBWD3-216ENST00000621396 KPNA7A9QM74 516 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 ENPP3O14638 875 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 ATMINO43313 823 aaPredicted RBP16.99■□□□□ 0.31
CBWD3-216ENST00000621396 MOCS3O95396 460 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 LILRA4P59901 499 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 CDR2Q01850 454 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 CLLU1OSQ5K130 101 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 TMCO2Q7Z6W1 182 aaPredicted RBP16.99■□□□□ 0.31
CBWD3-216ENST00000621396 C12orf29Q8N999 325 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 CYFIP2Q96F07 1278 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 HCSTQ9UBK5 93 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 TIMM13Q9Y5L4 95 aaPredicted RBP16.99■□□□□ 0.31
CBWD3-216ENST00000621396 CD19P15391 556 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 RAB27AP51159 221 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 NDST1P52848 882 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 GALCP54803 685 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 NAP1L1P55209 391 aaKnown RBP16.99■□□□□ 0.31
CBWD3-216ENST00000621396 ETF1P62495 437 aaKnown RBP16.99■□□□□ 0.31
CBWD3-216ENST00000621396 SOWAHAQ2M3V2 549 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 LLGL2Q6P1M3 1020 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 ZNF280BQ86YH2 543 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 ZNF606Q8WXB4 792 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 TAF4BQ92750 862 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 TOX2Q96NM4 488 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 ELOVL4Q9GZR5 314 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 THAP2Q9H0W7 228 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 PDCL3Q9H2J4 239 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 GOLPH3Q9H4A6 298 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 VRTNQ9H8Y1 702 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 TBX21Q9UL17 535 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 CAPN6Q9Y6Q1 641 aa16.99■□□□□ 0.31
CBWD3-216ENST00000621396 KRT86O43790 486 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 UPP2O95045 317 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 FTLP02792 175 aaPredicted RBP16.98■□□□□ 0.31
CBWD3-216ENST00000621396 PDGFRBP09619 1106 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 SLC35F6Q8N357 371 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 NENFQ9UMX5 172 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 CNTN6Q9UQ52 1028 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 TRIM43BA6NCK2 446 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 ENC1O14682 589 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 ITGB1P05556 798 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 CLTBP09497 229 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 LMO2P25791 158 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 ZNF132P52740 706 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 RAD23BP54727 409 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 CCDC142Q17RM4 750 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 NECAB2Q7Z6G3 386 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 TRIM43Q96BQ3 446 aaPredicted RBP16.98■□□□□ 0.31
CBWD3-216ENST00000621396 VWCEQ96DN2 955 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 FAM81BQ96LP2 452 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 SEZ6LQ9BYH1 1024 aa16.98■□□□□ 0.31
CBWD3-216ENST00000621396 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.97■□□□□ 0.31
CBWD3-216ENST00000621396 KIF5CO60282 957 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 CILPO75339 1184 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.97■□□□□ 0.31
CBWD3-216ENST00000621396 SLC4A11Q8NBS3 891 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 PGBD4Q96DM1 585 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 ARHGEF26Q96DR7 871 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 DPEP3Q9H4B8 488 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 OSGEPQ9NPF4 335 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 RALGAPA2Q2PPJ7 1873 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 PODXLO00592 558 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 XPOTO43592 962 aaKnown RBP16.97■□□□□ 0.31
CBWD3-216ENST00000621396 B3GAT3O94766 335 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 DDHD2O94830 711 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 TAF6P49848 677 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 NAA35Q5VZE5 725 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 FMNL3Q8IVF7 1028 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 LRRC52Q8N7C0 313 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 OR6B3Q8NGW1 331 aa16.97■□□□□ 0.31
CBWD3-216ENST00000621396 SEPT8Q92599 483 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms