RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 RTFDC1Q9BY42 306 aaPredicted RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 CLK4Q9HAZ1 481 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 MKNK2Q9HBH9 465 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 RIC8AQ9NPQ8 531 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 SELENONQ9NZV5 590 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 UVRAGQ9P2Y5 699 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 STK17AQ9UEE5 414 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 PHTF1Q9UMS5 762 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 PCSK6P29122 969 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 BTDP43251 543 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 FKBP3Q00688 224 aaKnown RBP10.93□□□□□ -0.66
VPS11-207ENST00000620429 C10orf76Q5T2E6 689 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 UBAP2Q5T6F2 1119 aaKnown RBP10.93□□□□□ -0.66
VPS11-207ENST00000620429 METTL21CQ5VZV1 264 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 TMEM214Q6NUQ4 689 aaKnown RBP10.93□□□□□ -0.66
VPS11-207ENST00000620429 UGT2A3Q6UWM9 527 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 CLNKQ7Z7G1 428 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 C11orf74Q86VG3 221 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 WDR75Q8IWA0 830 aaKnown RBP10.93□□□□□ -0.66
VPS11-207ENST00000620429 MCUR1Q96AQ8 359 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 C6orf50Q9HD87 102 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 NKIRAS1Q9NYS0 192 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 GRHL1Q9NZI5 618 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 TRAF3IP3Q9Y228 551 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 COQ6Q9Y2Z9 468 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 PFASO15067 1338 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 C6orf229H3BNL8 230 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 POLRMTO00411 1230 aaKnown RBP10.93□□□□□ -0.66
VPS11-207ENST00000620429 GYG2O15488 501 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 MUTP22033 750 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 TKTP29401 623 aaKnown RBP10.93□□□□□ -0.66
VPS11-207ENST00000620429 SLC5A2P31639 672 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 BCAP31P51572 246 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 AP2B1P63010 937 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 ARL13BQ3SXY8 428 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 C6orf183Q5T699 404 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 MAP3K21Q5TCX8 1036 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 SLFN11Q7Z7L1 901 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 BPHLQ86WA6 291 aaPredicted RBP10.93□□□□□ -0.66
VPS11-207ENST00000620429 TTC39CQ8N584 583 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 ANKRD36BP1Q96IX9 119 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 NDEL1Q9GZM8 345 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 PCDHB2Q9Y5E7 798 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 ACTL7BQ9Y614 415 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 ADGRA3Q8IWK6 1321 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 KLRF2D3W0D1 207 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 FAM47E-STBD1D6RA91 191 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 DGKIO75912 1065 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 PGM3O95394 542 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 CLPTM1O96005 669 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 EPS15P42566 896 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 TUBA4AP68366 448 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 NDUFA5Q16718 116 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 NADK2Q4G0N4 442 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 C14orf80Q86SX3 495 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 DNAAF5Q86Y56 855 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 SLC7A5P1Q8MH63 180 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 BIRC8Q96P09 236 aa10.93□□□□□ -0.66
VPS11-207ENST00000620429 ATP8B3O60423 1300 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 POTEMA6NI47 508 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 EDF1O60869 148 aaKnown RBP10.92□□□□□ -0.66
VPS11-207ENST00000620429 TSPY3P0CV98 308 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 TSPY8P0CW00 308 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 FGFR4P22455 802 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 GNA11P29992 359 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 CALCRLQ16602 461 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 TMEM266Q2M3C6 531 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 TRMT10CQ7L0Y3 403 aaKnown RBP10.92□□□□□ -0.66
VPS11-207ENST00000620429 ERI1Q8IV48 349 aaKnown RBP10.92□□□□□ -0.66
VPS11-207ENST00000620429 VPS52Q8N1B4 723 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 ALLCQ8N6M5 410 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 SNX29Q8TEQ0 813 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 RAD54LQ92698 747 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 SKA1Q96BD8 255 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 EFHD2Q96C19 240 aaPredicted RBP10.92□□□□□ -0.66
VPS11-207ENST00000620429 MXD3Q9BW11 206 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 SENP6Q9GZR1 1112 aaPredicted RBP10.92□□□□□ -0.66
VPS11-207ENST00000620429 PSTPIP2Q9H939 334 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 VAT1LQ9HCJ6 419 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 GPAMQ9HCL2 828 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 CYLDQ9NQC7 956 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 SNX9Q9Y5X1 595 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 CCDC88AQ3V6T2 1871 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 SOBPA7XYQ1 873 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 MAGEC1O60732 1142 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 DKC1O60832 514 aaKnown RBP eCLIP10.92□□□□□ -0.66
VPS11-207ENST00000620429 VCLP18206 1134 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 PDK3Q15120 406 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 LONRF1Q17RB8 773 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 ANKRD20A4Q4UJ75 823 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 FAM209AQ5JX71 171 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 NLRP9Q7RTR0 991 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 NET1Q7Z628 596 aaPredicted RBP10.92□□□□□ -0.66
VPS11-207ENST00000620429 RASSF3Q86WH2 238 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 JAMLQ86YT9 394 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 METTL25Q8N6Q8 603 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 UHMK1Q8TAS1 419 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms