RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 GRHL1Q9NZI5 618 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 COX16Q9P0S2 106 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 SEPT10Q9P0V9 454 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 EN1Q05925 392 aaPredicted RBP14.84□□□□□ -0.03
SYN2-205ENST00000620175 PPP6R3Q5H9R7 873 aaPredicted RBP14.84□□□□□ -0.03
SYN2-205ENST00000620175 NEDD1Q8NHV4 660 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 CNKSR1Q969H4 720 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 ENO3P13929 434 aaPredicted RBP14.84□□□□□ -0.03
SYN2-205ENST00000620175 PADI6Q6TGC4 694 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 C4orf50Q6ZRC1 276 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 ZNF572Q7Z3I7 529 aaPredicted RBP14.84□□□□□ -0.03
SYN2-205ENST00000620175 RHOT1Q8IXI2 618 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 KCTD6Q8NC69 237 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 NLRP7Q8WX94 980 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 ZNF668Q96K58 619 aaPredicted RBP14.84□□□□□ -0.03
SYN2-205ENST00000620175 VPS11Q9H270 941 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 EHMT1Q9H9B1 1298 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 KIAA1586Q9HCI6 787 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 ARHGAP26Q9UNA1 814 aa14.84□□□□□ -0.03
SYN2-205ENST00000620175 R3HDM2Q9Y2K5 976 aaKnown RBP14.84□□□□□ -0.03
SYN2-205ENST00000620175 AMPD1P23109 780 aa14.83□□□□□ -0.03
SYN2-205ENST00000620175 WDR4P57081 412 aaKnown RBP14.83□□□□□ -0.03
SYN2-205ENST00000620175 CAV1Q03135 178 aa14.83□□□□□ -0.03
SYN2-205ENST00000620175 C3orf67Q6ZVT6 689 aa14.83□□□□□ -0.03
SYN2-205ENST00000620175 ATP11CQ8NB49 1132 aa14.83□□□□□ -0.03
SYN2-205ENST00000620175 ASAP3Q8TDY4 903 aa14.83□□□□□ -0.03
SYN2-205ENST00000620175 NACC1Q96RE7 527 aa14.83□□□□□ -0.03
SYN2-205ENST00000620175 GGA1Q9UJY5 639 aa14.83□□□□□ -0.03
SYN2-205ENST00000620175 DCCP43146 1447 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 CCDC78A2IDD5 438 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 TRPC3Q13507 836 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 ITPK1Q13572 414 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 GPATCH4Q5T3I0 446 aaKnown RBP14.83□□□□□ -0.04
SYN2-205ENST00000620175 CLNKQ7Z7G1 428 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 DTNBP1Q96EV8 351 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 AGPAT3Q9NRZ7 376 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 ZDHHC18Q9NUE0 388 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.83□□□□□ -0.04
SYN2-205ENST00000620175 ABCB11O95342 1321 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 NRXN3Q9Y4C0 1643 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 TRIM49D1C9J1S8 452 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 KRT37O76014 449 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 LYNP07948 512 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 LIG4P49917 911 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 C16orf72Q14CZ0 275 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 ATG16L1Q676U5 607 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 GSTCDQ8NEC7 633 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 PAFAH2Q99487 392 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 MECRQ9BV79 373 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 CADM1Q9BY67 442 aaKnown RBP14.83□□□□□ -0.04
SYN2-205ENST00000620175 MRPL1Q9BYD6 325 aaKnown RBP14.83□□□□□ -0.04
SYN2-205ENST00000620175 ADA2Q9NZK5 511 aa14.83□□□□□ -0.04
SYN2-205ENST00000620175 ABCC6O95255 1503 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 RBAK-RBAKDNI3L0D1 243 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 DDX3YO15523 660 aaKnown RBP14.82□□□□□ -0.04
SYN2-205ENST00000620175 STAM2O75886 525 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 ADARP55265 1226 aaKnown RBP14.82□□□□□ -0.04
SYN2-205ENST00000620175 EFTUD2Q15029 972 aaKnown RBP eCLIP14.82□□□□□ -0.04
SYN2-205ENST00000620175 MFSD4BQ5TF39 518 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 RNF43Q68DV7 783 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 WDR60Q8WVS4 1066 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 ACCSQ96QU6 501 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 WDR35Q9P2L0 1181 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 SLC17A7Q9P2U7 560 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 GGPS1O95749 300 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 BAG6P46379 1132 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 RPS6P62753 249 aaKnown RBP14.82□□□□□ -0.04
SYN2-205ENST00000620175 ART3Q13508 389 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 MTHFD1LQ6UB35 978 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 KLHL23Q8NBE8 558 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 C1orf131Q8NDD1 294 aaKnown RBP14.82□□□□□ -0.04
SYN2-205ENST00000620175 LRRN4Q8WUT4 740 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 THAP11Q96EK4 314 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 TUBGCP5Q96RT8 1024 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 FHDC1Q9C0D6 1143 aaPredicted RBP14.82□□□□□ -0.04
SYN2-205ENST00000620175 TRPV6Q9H1D0 765 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 GPRC5CQ9NQ84 441 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 GIPC1O14908 333 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 GSC2O15499 205 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 APRTP07741 180 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 RTP1P59025 263 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 ESRRGP62508 458 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 RIPOR1Q6ZS17 1223 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 NDUFAF2Q8N183 169 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 EIF1ADQ8N9N8 165 aaKnown RBP14.82□□□□□ -0.04
SYN2-205ENST00000620175 FBXO36Q8NEA4 188 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 SH3TC2Q8TF17 1288 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 SREK1Q8WXA9 508 aaKnown RBP14.82□□□□□ -0.04
SYN2-205ENST00000620175 HAS1Q92839 578 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 SCYL1Q96KG9 808 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 NYXQ9GZU5 481 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 WWP1Q9H0M0 922 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
SYN2-205ENST00000620175 DNPEPQ9ULA0 475 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 TSC22D4Q9Y3Q8 395 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 ITSN1Q15811 1721 aa14.82□□□□□ -0.04
SYN2-205ENST00000620175 IFT172Q9UG01 1749 aa14.81□□□□□ -0.04
SYN2-205ENST00000620175 LRRIQ4A6NIV6 560 aa14.81□□□□□ -0.04
SYN2-205ENST00000620175 VCAM1P19320 739 aa14.81□□□□□ -0.04
SYN2-205ENST00000620175 PSMC1P62191 440 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms