RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 ATMINO43313 823 aaPredicted RBP16.31■□□□□ 0.2
PSMC3-213ENST00000619920 CABYRO75952 493 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 CFHP08603 1231 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 KCNE1P15382 129 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 CDH5P33151 784 aaPredicted RBP16.31■□□□□ 0.2
PSMC3-213ENST00000619920 TNNC1P63316 161 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 C2orf54Q08AI8 447 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 CLUL1Q15846 466 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 GLE1Q53GS7 698 aaKnown RBP16.31■□□□□ 0.2
PSMC3-213ENST00000619920 FAM228AQ86W67 206 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 LRRC52Q8N7C0 313 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 UBL4BQ8N7F7 174 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 USP38Q8NB14 1042 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 TMEM35BQ8NCS4 154 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 RUBCNQ92622 972 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 ZMAT2Q96NC0 199 aaKnown RBP16.31■□□□□ 0.2
PSMC3-213ENST00000619920 SDCBP2Q9H190 292 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 WNT8AQ9H1J5 351 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 CARD9Q9H257 536 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 LHX5Q9H2C1 402 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 NXF3Q9H4D5 531 aaKnown RBP16.31■□□□□ 0.2
PSMC3-213ENST00000619920 SMYD3Q9H7B4 428 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 CHST12Q9NRB3 414 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 ADAM22Q9P0K1 906 aa16.31■□□□□ 0.2
PSMC3-213ENST00000619920 DDX20Q9UHI6 824 aaKnown RBP16.31■□□□□ 0.2
PSMC3-213ENST00000619920 UBQLN1Q9UMX0 589 aaKnown RBP16.31■□□□□ 0.2
PSMC3-213ENST00000619920 NOC2LQ9Y3T9 749 aaKnown RBP16.31■□□□□ 0.2
PSMC3-213ENST00000619920 FAM170AA1A519 330 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 PGRMC1O00264 195 aaKnown RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 XPOTO43592 962 aaKnown RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 CEP104O60308 925 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 CILPO75339 1184 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 CD4P01730 458 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 MMP8P22894 467 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 RRM1P23921 792 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 BRD2P25440 801 aaKnown RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 GUCY2FP51841 1108 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 RAD23BP54727 409 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 PTPN11Q06124 597 aaPredicted RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 INCA1Q0VD86 236 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 PTP4A2Q12974 167 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 MESDQ14696 234 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 ARHGEF6Q15052 776 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 FAM47CQ5HY64 1035 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 TMCO3Q6UWJ1 677 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 RNF180Q86T96 592 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 PASD1Q8IV76 773 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 RAET1EQ8TD07 263 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 WHAMMQ8TF30 809 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 HNRNPLLQ8WVV9 542 aaKnown RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 PNKPQ96T60 521 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.3■□□□□ 0.21e-10■□□□□ 10.4
PSMC3-213ENST00000619920 SENP6Q9GZR1 1112 aaPredicted RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 MRPL47Q9HD33 250 aaKnown RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 TMEM59LQ9UK28 342 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 HES2Q9Y543 173 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 CEP83Q9Y592 693 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 TLR3O15455 904 aaKnown RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 CALB1P05937 261 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 COMTP21964 271 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 RAP1GAPP47736 663 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 CDH8P55286 799 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 ZNF394Q53GI3 561 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 PLEKHA7Q6IQ23 1121 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 TFAP2BQ92481 460 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 TMEM176AQ96HP8 235 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 RBM12Q9NTZ6 932 aaKnown RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 SMARCAL1Q9NZC9 954 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 EHD2Q9NZN4 543 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 CHORDC1Q9UHD1 332 aaPredicted RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 KIAA1257Q9ULG3 409 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 BARX2Q9UMQ3 279 aaPredicted RBP16.3■□□□□ 0.2
PSMC3-213ENST00000619920 IPPQ9Y573 584 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 SCINQ9Y6U3 715 aa16.3■□□□□ 0.2
PSMC3-213ENST00000619920 GRIN2DO15399 1336 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 SMIM28A0A1B0GU29 152 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 ERLIN1O75477 346 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 RPS6KA5O75582 802 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 ATF7P17544 494 aaPredicted RBP16.29■□□□□ 0.2
PSMC3-213ENST00000619920 CYP3A5P20815 502 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 CTNNA2P26232 953 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 SLC1A1P43005 524 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 MGAT3Q09327 533 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 PTPROQ16827 1216 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 MMS22LQ6ZRQ5 1243 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 SLC4A11Q8NBS3 891 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 SMG8Q8ND04 991 aaKnown RBP16.29■□□□□ 0.2
PSMC3-213ENST00000619920 CD101Q93033 1021 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 C11orf70Q9BRQ4 267 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 CXCL16Q9H2A7 254 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 PARVAQ9NVD7 372 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 PARP2Q9UGN5 583 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 LCMT1Q9UIC8 334 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 ANAPC7Q9UJX3 599 aa16.29■□□□□ 0.2
PSMC3-213ENST00000619920 CCDC66A2RUB6 948 aa16.28■□□□□ 0.2
PSMC3-213ENST00000619920 TMEM110-MUSTN1A8MSY1 372 aa16.28■□□□□ 0.2
PSMC3-213ENST00000619920 GPR182O15218 404 aa16.28■□□□□ 0.2
PSMC3-213ENST00000619920 CHRNA1P02708 482 aa16.28■□□□□ 0.2
PSMC3-213ENST00000619920 VDRP11473 427 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms