RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 HIST1H2AGP0C0S8 130 aaPredicted RBP11.52□□□□□ -0.57
POLR2A-209ENST00000617998 PTPN2P17706 415 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 CYP11B2P19099 503 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 EN2P19622 333 aaPredicted RBP11.52□□□□□ -0.57
POLR2A-209ENST00000617998 HIST1H2ADP20671 130 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 GABRR2P28476 465 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 ERVK-21P61565 698 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 STAT4Q14765 748 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 ZNF438Q7Z4V0 828 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 LENG1Q96BZ8 264 aaPredicted RBP11.52□□□□□ -0.57
POLR2A-209ENST00000617998 HIST1H2AHQ96KK5 128 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 HIST1H2AJQ99878 128 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 H2AFJQ9BTM1 129 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 GRPEL1Q9HAV7 217 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 PDGFCQ9NRA1 345 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 ARHGAP42A6NI28 874 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 NDUFB5O43674 189 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 OR1D2P34982 312 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 FANCCQ00597 558 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 KYNUQ16719 465 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 KLC3Q6P597 504 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 MTSS1LQ765P7 747 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 ING5Q8WYH8 240 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 C11orf70Q9BRQ4 267 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 IL23AQ9NPF7 189 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 SLC39A10Q9ULF5 831 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 FAM95CA0A1B0GW59 222 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 HTR1BP28222 390 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 VAV2P52735 878 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 EVCP57679 992 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 RETSATQ6NUM9 610 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 MFN1Q8IWA4 741 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 RAD9AQ99638 391 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 GULP1Q9UBP9 304 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 KIF13AQ9H1H9 1805 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 ARHGAP10A1A4S6 786 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 LUC7L3O95232 432 aaKnown RBP11.51□□□□□ -0.57
POLR2A-209ENST00000617998 SLFN14P0C7P3 912 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 CDH8P55286 799 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 PDIA5Q14554 519 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 FAM46CQ5VWP2 391 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 TMTC1Q8IUR5 882 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 LPPQ93052 612 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 OSBPL3Q9H4L5 887 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 SKILP12757 684 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 FSHRP23945 695 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 GUCY2CP25092 1073 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 NRSN1Q8IZ57 195 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 KLHL11Q9NVR0 708 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 ELOVL2Q9NXB9 296 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 BRPF3Q9ULD4 1205 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 MAPK13O15264 365 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 GARTP22102 1010 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 TBCCQ15814 346 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 HLA-CQ95604 372 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 SYNPO2Q9UMS6 1093 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 GABRQQ9UN88 632 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 UBR1Q8IWV7 1749 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 A0A1W2PQ45 241 aaPredicted RBP11.51□□□□□ -0.57
POLR2A-209ENST00000617998 A0A1W2PQY0 241 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 MAP3K7CLP57077 242 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 RHOAP61586 193 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 MTHFD1LQ6UB35 978 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 CAPN12Q6ZSI9 719 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 RASEFQ8IZ41 740 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 EPSTI1Q96J88 318 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 MAP3K14Q99558 947 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 NSRP1Q9H0G5 558 aaKnown RBP11.51□□□□□ -0.57
POLR2A-209ENST00000617998 KLF15Q9UIH9 416 aa11.51□□□□□ -0.57
POLR2A-209ENST00000617998 I3L4J1 428 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 MSH4O15457 936 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 HALP42357 657 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 ELOAQ14241 798 aaKnown RBP11.5□□□□□ -0.57
POLR2A-209ENST00000617998 SEZ6Q53EL9 994 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 NXNQ6DKJ4 435 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 LRRC69Q6ZNQ3 347 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PXYLP1Q8TE99 480 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 MRFAP1L1Q96HT8 127 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 TRIM45Q9H8W5 580 aaPredicted RBP11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PKP3Q9Y446 797 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 FAM47E-STBD1D6RA91 191 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PPP1R12AO14974 1030 aaPredicted RBP11.5□□□□□ -0.57
POLR2A-209ENST00000617998 MCF2P10911 925 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 CCNE1P24864 410 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 TMEM164Q5U3C3 297 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 KLHL7Q8IXQ5 586 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 SPACA6W5XKT8 324 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 ANGPTL8Q6UXH0 198 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 HVCN1Q96D96 273 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 C18orf8Q96DM3 657 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 SOHLH2Q9NX45 425 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PCDHA7Q9UN72 937 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 TOM1L1O75674 476 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 ATF2P15336 505 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 SMPD1P17405 629 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 SNRNP35Q16560 246 aaKnown RBP11.5□□□□□ -0.57
POLR2A-209ENST00000617998 OLFML2BQ68BL8 750 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PDZD8Q8NEN9 1154 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PPP1R13BQ96KQ4 1090 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PRDM12Q9H4Q4 367 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms