RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 NME3Q13232 169 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 C4orf22Q6V702 233 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 FUKQ8N0W3 1084 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 TAGAPQ8N103 731 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF786Q8N393 782 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 SCFD1Q8WVM8 642 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 TSPAN17Q96FV3 270 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM84BQ96KN1 310 aaPredicted RBP11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 PCDHGB4Q9UN71 923 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 CNTNAP5Q8WYK1 1306 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF335Q9H4Z2 1342 aaPredicted RBP11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 ZSCAN9O15535 394 aaPredicted RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 DGKIO75912 1065 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 MYO1DO94832 1006 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 CRKP46108 304 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 MEI1Q5TIA1 1274 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 MTDHQ86UE4 582 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 KCTD17Q8N5Z5 321 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 NMD3Q96D46 503 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 AGAP3Q96P47 875 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 ARHGEF40Q8TER5 1519 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 A8MXQ7 604 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 SERPINI2O75830 405 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 PYGLP06737 847 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 POLBP06746 335 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 THRAP10827 490 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 AKR1B1P15121 316 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 YWHABP31946 246 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 RBBP7Q16576 425 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 WDR72Q3MJ13 1102 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 MROH9Q5TGP6 573 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 PPHLN1Q8NEY8 458 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 JADE3Q92613 823 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 CELF1Q92879 486 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 HERC5Q9UII4 1024 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 CNOT7Q9UIV1 285 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 CRB1P82279 1406 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 PXDNLA1KZ92 1463 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 A2ML1A8K2U0 1454 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 MYO5CQ9NQX4 1742 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 PSMD3O43242 534 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 ATP6V1E1P36543 226 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 EFNA5P52803 228 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 ARPP19P56211 112 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 RPS6P62753 249 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 MTM1Q13496 603 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 R3HDM1Q15032 1099 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 SUPT20HL1Q3ZLR7 823 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 LZICQ8WZA0 190 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 SHCBP1LQ9BZQ2 653 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 KLHL4Q9C0H6 718 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM49AQ9H0Q0 323 aaPredicted RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 RAVER2Q9HCJ3 691 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 NSMCE4AQ9NXX6 385 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 ARHGAP20Q9P2F6 1191 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 NRKQ7Z2Y5 1582 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 HSD17B4P51659 736 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 VCPP55072 806 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF543Q08ER8 600 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 STILQ15468 1287 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 COBLL1Q53SF7 1204 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 FEZF2Q8TBJ5 459 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 NSUN4Q96CB9 384 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 OPTNQ96CV9 577 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 SH3GL2Q99962 352 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 CASS4Q9NQ75 786 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF446Q9NWS9 450 aa11.14□□□□□ -0.63
CLTCL1-209ENST00000617103 NFIBO00712 420 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 RPA1P27694 616 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 MXD4Q14582 209 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 SNX30Q5VWJ9 437 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 SZRD1Q7Z422 152 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 AENQ8WTP8 325 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 PDCD6IPQ8WUM4 868 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 PTPRN2Q92932 1015 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 PLA2G12BQ9BX93 195 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 TRIM54Q9BYV2 358 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 TMEM8AQ9HCN3 771 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 KCND1Q9NSA2 647 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 USP21Q9UK80 565 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 ADORA2BP29275 332 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 STIP1P31948 543 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 NCOA4Q13772 614 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 ARHGAP22Q7Z5H3 698 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 ATXN2LQ8WWM7 1075 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 EPAS1Q99814 870 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 ILKAPQ9H0C8 392 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 GIMAP4Q9NUV9 329 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 WDR70Q9NW82 654 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 FBXO40Q9UH90 709 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 TAGLN3Q9UI15 199 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 A0A0A6YYK5 440 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 APBA3O96018 575 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 KBTBD12Q3ZCT8 623 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 ZC2HC1CQ53FD0 456 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 DEPDC1Q5TB30 811 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 GJB7Q6PEY0 223 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms