RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 NIF3L1Q9GZT8 377 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 PARP2Q9UGN5 583 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 STXBP5LQ9Y2K9 1186 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ANK1P16157 1881 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 SMIM35A0A1B0GVV1 85 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 DUSP11O75319 330 aaKnown RBP8.31□□□□□ -1.08
NEK3-207ENST00000617054 POU5F1BQ06416 359 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 TUBB2AQ13885 445 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 CFAP221Q4G0U5 840 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 CYP4A22Q5TCH4 519 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 MFSD14CQ5VZR4 134 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 SLFN11Q7Z7L1 901 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 MCOLN2Q8IZK6 566 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 C12orf29Q8N999 325 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 ARRDC4Q8NCT1 418 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 C1orf131Q8NDD1 294 aaKnown RBP8.31□□□□□ -1.08
NEK3-207ENST00000617054 CXorf38Q8TB03 319 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 TUBB2BQ9BVA1 445 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 ST7Q9NRC1 585 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 DPP3Q9NY33 737 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 INTUQ9ULD6 942 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 SCN1AP35498 2009 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 MROH7Q68CQ1 1323 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 A0A0A6YYK5 440 aaPredicted RBP8.31□□□□□ -1.08
NEK3-207ENST00000617054 TOMM70O94826 608 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 GZMAP12544 262 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 PRLRP16471 622 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 NSFP46459 744 aaKnown RBP8.31□□□□□ -1.08
NEK3-207ENST00000617054 IFI16Q16666 785 aaKnown RBP8.31□□□□□ -1.08
NEK3-207ENST00000617054 ZNF667Q5HYK9 610 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 CC2D1AQ6P1N0 951 aaPredicted RBP8.31□□□□□ -1.08
NEK3-207ENST00000617054 TMCO3Q6UWJ1 677 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 ENOSF1Q7L5Y1 443 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 ZNF410Q86VK4 478 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 HPDLQ96IR7 371 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 ZFP42Q96MM3 310 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 XPNPEP3Q9NQH7 507 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 PCDH10Q9P2E7 1040 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 ANAPC7Q9UJX3 599 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 NOC2LQ9Y3T9 749 aaKnown RBP8.31□□□□□ -1.08
NEK3-207ENST00000617054 NCANO14594 1321 aa8.31□□□□□ -1.08
NEK3-207ENST00000617054 RECQL4O94761 1208 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 FGGP02679 453 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 RARBP10826 455 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 TBXAS1P24557 533 aaPredicted RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 ANXA13P27216 316 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 GJC1P36383 396 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 RPL7AP62424 266 aaKnown RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 CKAP4Q07065 602 aaKnown RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 NOGQ13253 232 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 SLC27A1Q6PCB7 646 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 WDTC1Q8N5D0 677 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 LPPQ93052 612 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 HES6Q96HZ4 224 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 DDX47Q9H0S4 455 aaKnown RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 ADAM22Q9P0K1 906 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 USTQ9Y2C2 406 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 DDX3YO15523 660 aaKnown RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 GLI1P08151 1106 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 NOMO3P69849 1222 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 ZNF618Q5T7W0 954 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 TWF2Q6IBS0 349 aaKnown RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 FMNL3Q8IVF7 1028 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 UBA3Q8TBC4 463 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 TRMT13Q9NUP7 481 aaKnown RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 CYTH4Q9UIA0 394 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 SNX9Q9Y5X1 595 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 CITO14578 2027 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 GRIN2DO15399 1336 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 TCRBV7S2A1N4TA0A589 114 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 SEPT4O43236 478 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 SPOPO43791 374 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 IL18RAPO95256 599 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 CYP1A1P04798 512 aaPredicted RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 TCF4P15884 667 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 SSR1P43307 286 aaKnown RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 DENND1BQ6P3S1 775 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 NOTUMQ6P988 496 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 RHOT2Q8IXI1 618 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 USP38Q8NB14 1042 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 RNF169Q8NCN4 708 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 WHAMMQ8TF30 809 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 CCDC94Q9BW85 323 aaPredicted RBP8.3□□□□□ -1.08
NEK3-207ENST00000617054 ELOVL4Q9GZR5 314 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 CDY2AQ9Y6F7 541 aa8.3□□□□□ -1.08
NEK3-207ENST00000617054 CHRNA1P02708 482 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 CYP1A2P05177 515 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 AP3M2P53677 418 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 RAD23BP54727 409 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 GJA9P57773 515 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 SURF1Q15526 300 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 CCDC142Q17RM4 750 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 LONRF2Q1L5Z9 754 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 ATP13A4Q4VNC1 1196 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 FAM228AQ86W67 206 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 SYCE1Q8N0S2 351 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 UBR7Q8N806 425 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 MSANTD4Q8NCY6 345 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 IFT81Q8WYA0 676 aa8.29□□□□□ -1.08
NEK3-207ENST00000617054 ACSF2Q96CM8 615 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms