RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 MMS19Q96T76 1030 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 GDF15Q99988 308 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 OXCT2Q9BYC2 517 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-217ENST00000616545 CWH43Q9H720 699 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 CISHQ9NSE2 258 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 ABHD10Q9NUJ1 306 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 BARX2Q9UMQ3 279 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-217ENST00000616545 SF3B1O75533 1304 aaKnown RBP eCLIP12.46□□□□□ -0.41
TARDBP-217ENST00000616545 LRRC53A6NM62 1247 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 FOXN3O00409 490 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-217ENST00000616545 CYB561D2O14569 222 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 PPEF2O14830 753 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 TADA2AO75478 443 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 CAPN15O75808 1086 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 GFPT2O94808 682 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 CYP11A1P05108 521 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 PAEPP09466 180 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 FECHP22830 423 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 WARSP23381 471 aaKnown RBP12.46□□□□□ -0.41
TARDBP-217ENST00000616545 PRKCIP41743 596 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 LHX1P48742 406 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 GATMP50440 423 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 BCAR1P56945 870 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 PTK2Q05397 1052 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 PTPN21Q16825 1174 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 ARHGAP44Q17R89 818 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 PAN2Q504Q3 1202 aaKnown RBP12.46□□□□□ -0.41
TARDBP-217ENST00000616545 HS1BP3Q53T59 392 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 GPR65Q8IYL9 337 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 UBR7Q8N806 425 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 CLP1Q92989 425 aaKnown RBP12.46□□□□□ -0.41
TARDBP-217ENST00000616545 UBE2OQ9C0C9 1292 aaKnown RBP12.46□□□□□ -0.41
TARDBP-217ENST00000616545 CXXC1Q9P0U4 656 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-217ENST00000616545 ADAM28Q9UKQ2 775 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 PCDHB8Q9UN66 801 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 PCDHB12Q9Y5F1 795 aa12.46□□□□□ -0.41
TARDBP-217ENST00000616545 FNDC1Q4ZHG4 1894 aaPredicted RBP12.45□□□□□ -0.42
TARDBP-217ENST00000616545 SSU72P8A0A1W2PR75 194 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 GABRDO14764 452 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 SPTLC1O15269 473 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 TLL1O43897 1013 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 CILPO75339 1184 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 KIF4AO95239 1232 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 SERPING1P05155 500 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 ACO1P21399 889 aaKnown RBP12.45□□□□□ -0.42
TARDBP-217ENST00000616545 SLC11A1P49279 550 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 ADKP55263 362 aaKnown RBP12.45□□□□□ -0.42
TARDBP-217ENST00000616545 APBA1Q02410 837 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 ASIC2Q16515 512 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 SOWAHAQ2M3V2 549 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 TIGD5Q53EQ6 642 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 SPOUT1Q5T280 376 aaKnown RBP12.45□□□□□ -0.42
TARDBP-217ENST00000616545 GJB7Q6PEY0 223 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 KCNT2Q6UVM3 1135 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 CD300LGQ6UXG3 332 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 CYP26C1Q6V0L0 522 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 VPS36Q86VN1 386 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 ZNF677Q86XU0 584 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 TMTC1Q8IUR5 882 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 LRRC8AQ8IWT6 810 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 ADGRF2Q8IZF7 708 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 TNIP3Q96KP6 325 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 SAMD11Q96NU1 681 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 PAAF1Q9BRP4 392 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 PLVAPQ9BX97 442 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 NT5C1AQ9BXI3 368 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 GPR88Q9GZN0 384 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 SNX25Q9H3E2 840 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 DNAJB4Q9UDY4 337 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 POLIQ9UNA4 740 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 PCDHB4Q9Y5E5 795 aa12.45□□□□□ -0.42
TARDBP-217ENST00000616545 DNAH12Q6ZR08 3092 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-217ENST00000616545 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-217ENST00000616545 RNF225M0QZC1 329 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-217ENST00000616545 WEE2P0C1S8 567 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 KRT5P13647 590 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 PCSK1P29120 753 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 GNL1P36915 607 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-217ENST00000616545 ZNF132P52740 706 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 KRT17Q04695 432 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 KLHL30Q0D2K2 578 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 STILQ15468 1287 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 FAM117BQ6P1L5 589 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 FUT10Q6P4F1 479 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 TMEM270Q6UE05 265 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-217ENST00000616545 IRF2BP2Q7Z5L9 587 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 CCDC170Q8IYT3 715 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 THEM5Q8N1Q8 247 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 SLC39A11Q8N1S5 342 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 COLGALT1Q8NBJ5 622 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 RBBP8NLQ8NC74 664 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-217ENST00000616545 C3orf58Q8NDZ4 430 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 KAT5Q92993 513 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 IGSF21Q96ID5 467 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 ARID3AQ99856 593 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 BAG1Q99933 345 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms