RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 TMX2Q9Y320 296 aa15.14■□□□□ 0.01
EPHB4-210ENST00000616502 PLCH1Q4KWH8 1693 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 SPDYE5A6NIY4 337 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 GJB6O95452 261 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 TAC1P20366 129 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 JAM2P57087 298 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 MPP2Q14168 576 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 BRDTQ58F21 947 aaPredicted RBP15.13■□□□□ 0.01
EPHB4-210ENST00000616502 PCNX4Q63HM2 1172 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 C15orf52Q6ZUT6 534 aaKnown RBP15.13■□□□□ 0.01
EPHB4-210ENST00000616502 CCDC110Q8TBZ0 833 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 RNF217Q8TC41 542 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 TRPM4Q8TD43 1214 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 DCPSQ96C86 337 aaKnown RBP15.13■□□□□ 0.01
EPHB4-210ENST00000616502 GTF3C4Q9UKN8 822 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 NCANO14594 1321 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 CCDC189A1A4V9 331 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 SMNDC1O75940 238 aaKnown RBP eCLIP15.13■□□□□ 0.01
EPHB4-210ENST00000616502 FOXN2P32314 431 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 ACOT2P49753 483 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 LMNB2Q03252 620 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 ARMC3Q5W041 872 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 TMEM270Q6UE05 265 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 MORC4Q8TE76 937 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 PCDHB18PQ96TA0 734 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 SLC13A1Q9BZW2 595 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 ARHGEF3Q9NR81 526 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 ARMCX1Q9P291 453 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 ADAMTS7Q9UKP4 1686 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 B2RBV5 119 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 ADM5C9JUS6 153 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 H3BRJ5 948 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 CYP11B1P15538 503 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 TMPRSS15P98073 1019 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 CNTN2Q02246 1040 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 KPNB1Q14974 876 aaKnown RBP15.13■□□□□ 0.01
EPHB4-210ENST00000616502 KRT39Q6A163 491 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 ISLR2Q6UXK2 745 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 SMC1BQ8NDV3 1235 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 FAM213AQ9BRX8 229 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 THTPAQ9BU02 230 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 TSSK1BQ9BXA7 367 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 KCNMB3Q9NPA1 279 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 KMT5AQ9NQR1 393 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 PCDHA3Q9Y5H8 950 aa15.13■□□□□ 0.01
EPHB4-210ENST00000616502 KRT36O76013 467 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 RHOT1Q8IXI2 618 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.12■□□□□ 0.01
EPHB4-210ENST00000616502 SCG3Q8WXD2 468 aaKnown RBP15.12■□□□□ 0.01
EPHB4-210ENST00000616502 CEP350Q5VT06 3117 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 LPXNO60711 386 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 SLITRK3O94933 977 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 ETS1P14921 441 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 HOXD13P35453 343 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 NR1H3Q13133 447 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.12■□□□□ 0.01
EPHB4-210ENST00000616502 DCAF15Q66K64 600 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 SCARA5Q6ZMJ2 495 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 NLRP4Q96MN2 994 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 MAK16Q9BXY0 300 aaKnown RBP15.12■□□□□ 0.01
EPHB4-210ENST00000616502 SEL1LQ9UBV2 794 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 R3HDM2Q9Y2K5 976 aaKnown RBP15.12■□□□□ 0.01
EPHB4-210ENST00000616502 UBR2Q8IWV8 1755 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 DENND3A2RUS2 1198 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 EIF3DO15371 548 aaKnown RBP eCLIP15.12■□□□□ 0.012e-7■■■□□ 14.8
EPHB4-210ENST00000616502 BANF1O75531 89 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 CACNA2D1P54289 1103 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 TRAF1Q13077 416 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 BSPRYQ5W0U4 402 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 SLC25A41Q8N5S1 370 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 ZSWIM2Q8NEG5 633 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 CFAP36Q96G28 342 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 COL20A1Q9P218 1284 aa15.12■□□□□ 0.01
EPHB4-210ENST00000616502 ZWINTO95229 277 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 ADRA1DP25100 572 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 POU5F1Q01860 360 aaKnown RBP15.11■□□□□ 0.01
EPHB4-210ENST00000616502 DMP1Q13316 513 aaPredicted RBP15.11■□□□□ 0.01
EPHB4-210ENST00000616502 CUL3Q13618 768 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 NBPF20Q3BBV1 942 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 C3orf62Q6ZUJ4 267 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 FBXL13Q8NEE6 735 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 EPS8L1Q8TE68 723 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 C10orf88Q9H8K7 445 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 CYP4F11Q9HBI6 524 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 FEM1BQ9UK73 627 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 SMG5Q9UPR3 1016 aaKnown RBP15.11■□□□□ 0.01
EPHB4-210ENST00000616502 MAD1L1Q9Y6D9 718 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 PFDN1O60925 122 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 ITGB5P18084 799 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 PTPN4P29074 926 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 LIG4P49917 911 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 VTI1AQ96AJ9 217 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 CALN1Q9BXU9 219 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 SHCBP1LQ9BZQ2 653 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 EPB41L4BQ9H329 900 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 DENND2DQ9H6A0 471 aaPredicted RBP15.11■□□□□ 0.01
EPHB4-210ENST00000616502 OLFML3Q9NRN5 406 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 IRS2Q9Y4H2 1338 aa15.11■□□□□ 0.01
EPHB4-210ENST00000616502 BTAF1O14981 1849 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms