RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 LRRC3Q9BY71 257 aa22.55■■□□□ 1.2
TRAPPC3-208ENST00000616074 ZNF334Q9HCZ1 680 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC3-208ENST00000616074 SCN1AP35498 2009 aa22.55■■□□□ 1.2
TRAPPC3-208ENST00000616074 F5P12259 2224 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 MTMR11A4FU01 709 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 TBCAO75347 108 aaKnown RBP22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 NFICP08651 508 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 LILRA4P59901 499 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 GTF2BQ00403 316 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 PLD1Q13393 1074 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 BRAPQ7Z569 592 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 CD302Q8IX05 232 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 ZNF687Q8N1G0 1237 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 DCLK2Q8N568 766 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 DEPDC1BQ8WUY9 529 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 LARP4BQ92615 738 aaKnown RBP22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 RUBCNQ92622 972 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 TMEM209Q96SK2 561 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 SLITRK6Q9H5Y7 841 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 UPF2Q9HAU5 1272 aaKnown RBP22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 TRPV4Q9HBA0 871 aa22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 NDRG2Q9UN36 371 aaKnown RBP22.54■■□□□ 1.2
TRAPPC3-208ENST00000616074 TCHHQ07283 1943 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 A0A1W2PRU2 124 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 TISP43B9A030 160 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 ANKRD63C9JTQ0 380 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 MAN2B1O00754 1011 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 SPTLC1O15269 473 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 ODC1P11926 461 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 MYBPC2Q14324 1141 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 ZC2HC1CQ53FD0 456 aaPredicted RBP22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 C9orf57Q5W0N0 161 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 CENPPQ6IPU0 288 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 TSSK4Q6SA08 328 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 ERMP1Q7Z2K6 904 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 ATAD1Q8NBU5 361 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 SENP8Q96LD8 212 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 TRPV5Q9NQA5 729 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 PRMT8Q9NR22 394 aaPredicted RBP22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 SLC27A5Q9Y2P5 690 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 PCDHGA2Q9Y5H1 932 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 NUP210Q8TEM1 1887 aaPredicted RBP22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 CACNA1AO00555 2505 aa22.53■■□□□ 1.2
TRAPPC3-208ENST00000616074 GPR179Q6PRD1 2367 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 HEPACAM2A8MVW5 462 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 ACOT2P49753 483 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 EPHB3P54753 998 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 MTAPQ13126 283 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 TMEM132DQ14C87 1099 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 MFSD6LQ8IWD5 586 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 TTC9BQ8N6N2 239 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 ZBTB44Q8NCP5 570 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 RMDN1Q96DB5 314 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 RSPRY1Q96DX4 576 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 GPR88Q9GZN0 384 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 PIAS3Q9Y6X2 628 aa22.52■■□□□ 1.2
TRAPPC3-208ENST00000616074 PIRO00625 290 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 ZNF263O14978 683 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 SOAT2O75908 522 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 ABCD1P33897 745 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 ALDH1A3P47895 512 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 STXBP5Q5T5C0 1151 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 OR10T2Q8NGX3 314 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 ATRIPQ8WXE1 791 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 FAM3CQ92520 227 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 NELL1Q92832 810 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 CCSER1Q9C0I3 900 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 ZSCAN32Q9NX65 697 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 DERAQ9Y315 318 aa22.51■■□□□ 1.19
TRAPPC3-208ENST00000616074 ANO9A1A5B4 782 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 ARNTLO00327 626 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 DDIT3P35638 169 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 ADALQ6DHV7 355 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 ARMCX5Q6P1M9 558 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 USP49Q70CQ1 688 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 BORCS6Q96GS4 357 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 EPSTI1Q96J88 318 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 IKZF4Q9H2S9 585 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 CHRDQ9H2X0 955 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 ST6GALNAC4Q9H4F1 302 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 ASB7Q9H672 318 aa22.5■■□□□ 1.19
TRAPPC3-208ENST00000616074 VPS37CA5D8V6 355 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 LILRB5O75023 590 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 CYP11A1P05108 521 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 PAX3P23760 479 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 GAREM2Q75VX8 874 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 DNAJB7Q7Z6W7 309 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 GPIHBP1Q8IV16 184 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 KRI1Q8N9T8 703 aaKnown RBP22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 PSMG2Q969U7 264 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 E2F7Q96AV8 911 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 MKNK1Q9BUB5 465 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 AGO2Q9UKV8 859 aaKnown RBP22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 C2CD2Q9Y426 696 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 ASB3Q9Y575 518 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 CLIC4Q9Y696 253 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 STYXL1Q9Y6J8 313 aa22.49■■□□□ 1.19
TRAPPC3-208ENST00000616074 CDR1P51861 262 aa22.48■■□□□ 1.19
TRAPPC3-208ENST00000616074 PTPAQ15257 358 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms