RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 AP1S2P56377 157 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 RNF44Q7L0R7 432 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 TRPM8Q7Z2W7 1104 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 ITIH5Q86UX2 942 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 USP7Q93009 1102 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 DESI2Q9BSY9 194 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 TDRD3Q9H7E2 651 aaKnown RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 STARD7Q9NQZ5 370 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 ING3Q9NXR8 418 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 CFTRP13569 1480 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 MTA2O94776 668 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 PDGFRBP09619 1106 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 GSPT1P15170 499 aaKnown RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 ARF4P18085 180 aaPredicted RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 YY1P25490 414 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 DR1Q01658 176 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 POU4F1Q01851 419 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 IFT88Q13099 833 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 KLHL38Q2WGJ6 581 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 ATAD3BQ5T9A4 648 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 TRIM64BA6NI03 449 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 GNRH1P01148 92 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 NCAM1P13591 858 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 CLMNQ96JQ2 1002 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 AVENQ9NQS1 362 aaPredicted RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 SAC3D1A6NKF1 404 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 WWP2O00308 870 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 NCF4Q15080 339 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 ZC3H18Q86VM9 953 aaKnown RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 SIKE1Q9BRV8 207 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 EPB41L5Q9HCM4 733 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 SCN3BQ9NY72 215 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 TTC7AQ9ULT0 858 aaPredicted RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 DUOXA2Q1HG44 320 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 SYCP2LQ5T4T6 812 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 TREML1Q86YW5 311 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 IZUMO1Q8IYV9 350 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 PRRG3Q9BZD7 231 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 MANSC1Q9H8J5 431 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 SNX4O95219 450 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 CDH6P55285 790 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 FNDC3BQ53EP0 1204 aaKnown RBP13.19□□□□□ -0.3
TCF4-248ENST00000616053 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 GTF3C2Q8WUA4 911 aaPredicted RBP13.19□□□□□ -0.3
TCF4-248ENST00000616053 MIEF1Q9NQG6 463 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 ZFATQ9P243 1243 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 SNX8Q9Y5X2 465 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 FANCAO15360 1455 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 PNMA6FA0A0J9YX94 578 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 VWA5AO00534 786 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 CD4P01730 458 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 PSMC6P62333 389 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 TRMT11Q7Z4G4 463 aaKnown RBP13.19□□□□□ -0.3
TCF4-248ENST00000616053 STX12Q86Y82 276 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 NACC2Q96BF6 587 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 BTBD18B2RXH4 712 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 MMEP08473 750 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 DEFA1P59665 94 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 DEFA3P59666 94 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 DSG4Q86SJ6 1040 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 PPP1R2P1Q96PQ5 205 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 CNOT8Q9UFF9 292 aaKnown RBP13.19□□□□□ -0.3
TCF4-248ENST00000616053 GNG14A0A1W2PPG7 69 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 SLC16A4O15374 487 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 STX7O15400 261 aaKnown RBP13.19□□□□□ -0.3
TCF4-248ENST00000616053 TEX33O43247 280 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 DSG3P32926 999 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 SYTL5Q8TDW5 730 aaPredicted RBP13.19□□□□□ -0.3
TCF4-248ENST00000616053 SCFD2Q8WU76 684 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 SUCLG2Q96I99 432 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 VSTM5A8MXK1 200 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 SFNP31947 248 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 ORC2Q13416 577 aaPredicted RBP13.19□□□□□ -0.3
TCF4-248ENST00000616053 SARM1Q6SZW1 724 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 OLFM1Q99784 485 aa13.19□□□□□ -0.3
TCF4-248ENST00000616053 RHOBTB1O94844 696 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 SUPT20HL2P0C7V6 817 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 NDUFV1P49821 464 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 C20orf194Q5TEA3 1177 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 APOA5Q6Q788 366 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 NRSN1Q8IZ57 195 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 GLMNQ92990 594 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 MGAT4DA6NG13 374 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 MYMKA6NI61 221 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 PTPN3P26045 913 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 NFIL3Q16649 462 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 BRSK2Q8IWQ3 736 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 PBKQ96KB5 322 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 SNX9Q9Y5X1 595 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 ZNF655Q8N720 491 aaPredicted RBP13.18□□□□□ -0.3
TCF4-248ENST00000616053 ATP6V0D2Q8N8Y2 350 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 SLITRK2Q9H156 845 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 A0A088AWK7 358 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms