RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 COA7Q96BR5 231 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 MRGPRX4Q96LA9 322 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 MYOCQ99972 504 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 PCGF6Q9BYE7 350 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 RLIMQ9NVW2 624 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 JKAMPQ9P055 326 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 LRP12Q9Y561 859 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 COL4A3BPQ9Y5P4 624 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 A0A1W2PS29 197 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 CCDC154A6NI56 674 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 GRM6O15303 877 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 PCDHGA12O60330 932 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 KATNA1O75449 491 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 BMP15O95972 392 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 IGKV2-30P06310 120 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 FTH1P19P0C7X4 201 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 FCER1AP12319 257 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 FXR1P51114 621 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 NOMO3P69849 1222 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 TLE1Q04724 770 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 PIGFQ07326 219 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 FHL1Q13642 323 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 NOMO2Q5JPE7 1267 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 TMEM240Q5SV17 173 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 THEMIS2Q5TEJ8 643 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 TMED8Q6PL24 325 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 Q6ZNX1 250 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 CLNKQ7Z7G1 428 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 LNX2Q8N448 690 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 SLC44A3Q8N4M1 653 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 IL17RDQ8NFM7 739 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 NSUN6Q8TEA1 469 aaKnown RBP3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 MARS2Q96GW9 593 aaKnown RBP3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 CCDC136Q96JN2 1154 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 Q96MF0 132 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 GSTO2Q9H4Y5 243 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 UNKLQ9H9P5 680 aaKnown RBP3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 GNL3LQ9NVN8 582 aaKnown RBP3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 SIDT1Q9NXL6 827 aaKnown RBP3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 KCTD5Q9NXV2 234 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 USP25Q9UHP3 1055 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 POLHQ9Y253 713 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 PCDHGA9Q9Y5G4 932 aaKnown RBP3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 PCDHGA8Q9Y5G5 932 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 PCDHGA7Q9Y5G6 932 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 PCDHGA6Q9Y5G7 932 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 PCDHGA3Q9Y5H0 932 aa3.34□□□□□ -1.87
HMGB1P24-202ENST00000615653 KAT6AQ92794 2004 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 TRGV11A0A075B6L2 103 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 E7ENX8 843 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 ORC4O43929 436 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 SLC43A1O75387 559 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 EIF3JO75822 258 aaKnown RBP3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 PRSS23O95084 383 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 CD1AP06126 327 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 KCNA2P16389 499 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 RECQLP46063 649 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 FOXG1P55316 489 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 IRX6P78412 446 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 TAP2Q03519 686 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 ZNF844Q08AG5 666 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 PCBP2Q15366 365 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 PTPN21Q16825 1174 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 UAP1L1Q3KQV9 507 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 C3orf36Q3SXR2 165 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 ATG9BQ674R7 924 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 ARHGEF25Q86VW2 580 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 PDSS2Q86YH6 399 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 CCAR1Q8IX12 1150 aaKnown RBP3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 MIER2Q8N344 545 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 RGMAQ96B86 450 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 FCRL4Q96PJ5 515 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 WACQ9BTA9 647 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 ASPSCR1Q9BZE9 553 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 KIAA1586Q9HCI6 787 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 PCDH12Q9NPG4 1184 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 CASS4Q9NQ75 786 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 HOMER2Q9NSB8 354 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 INTS13Q9NVM9 706 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 LRIT1Q9P2V4 623 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 HSFX1Q9UBD0 423 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 PCDHA13Q9Y5I0 950 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 AATKQ6ZMQ8 1374 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
HMGB1P24-202ENST00000615653 PRAMEF33A0A0G2JMD5 474 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CCDC195A0A1B0GUA6 201 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CCDC78A2IDD5 438 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CCDC151A5D8V7 595 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 SLC16A6O15403 523 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 PRAMEF10O60809 474 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 AGFG2O95081 481 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CHEK2O96017 543 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CENPBP07199 599 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 SRGNP10124 158 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 VCAM1P19320 739 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CCND1P24385 295 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 EDNRBP24530 442 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 SLC6A4P31645 630 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CYP2C19P33261 490 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 PTGER1P34995 402 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms