RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 SCUBE3Q8IX30 993 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 TMEFF1Q8IYR6 380 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 ETNPPLQ8TBG4 499 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 PIP4K2CQ8TBX8 421 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 RLN3Q8WXF3 142 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 PPP1R10Q96QC0 940 aaKnown RBP7.58□□□□□ -1.2
MUC1-227ENST00000615517 FNBP1Q96RU3 617 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 MTRQ99707 1265 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 FAM83CQ9BQN1 747 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 GTPBP2Q9BX10 602 aaKnown RBP7.58□□□□□ -1.2
MUC1-227ENST00000615517 SMG9Q9H0W8 520 aaKnown RBP7.58□□□□□ -1.2
MUC1-227ENST00000615517 CRISPLD1Q9H336 500 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 PRORYQ9H606 182 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 GKN1Q9NS71 199 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 RBM28Q9NW13 759 aaKnown RBP7.58□□□□□ -1.2
MUC1-227ENST00000615517 AFF4Q9UHB7 1163 aaKnown RBP7.58□□□□□ -1.2
MUC1-227ENST00000615517 BRPF3Q9ULD4 1205 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 YIPF1Q9Y548 306 aa7.58□□□□□ -1.2
MUC1-227ENST00000615517 TNFRSF10BO14763 440 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 OPHN1O60890 802 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 GABBR2O75899 941 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 HNRNPLP14866 589 aaKnown RBP eCLIP7.57□□□□□ -1.2
MUC1-227ENST00000615517 DRD1P21728 446 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 GLRA2P23416 452 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 ITPKBP27987 946 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 ARL2P36404 184 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 MCM2P49736 904 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 USP11P51784 963 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 RUNX3Q13761 415 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 HNRNPDQ14103 355 aaKnown RBP7.57□□□□□ -1.2
MUC1-227ENST00000615517 MXD4Q14582 209 aaPredicted RBP7.57□□□□□ -1.2
MUC1-227ENST00000615517 RTN1Q16799 776 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 GPR158Q5T848 1215 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 B4GALNT3Q6L9W6 998 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 TOGARAM2Q6ZUX3 1019 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 NOSTRINQ8IVI9 506 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 EXOC8Q8IYI6 725 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 HDDC3Q8N4P3 179 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 MINDY1Q8N5J2 469 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 MDGA1Q8NFP4 955 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 TSTD1Q8NFU3 115 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 OLIG1Q8TAK6 271 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 RIN3Q8TB24 985 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 NFKBIZQ9BYH8 718 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 EBF3Q9H4W6 596 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 PDZD7Q9H5P4 517 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 CAPN10Q9HC96 672 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 C6orf50Q9HD87 102 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 PILRBQ9UKJ0 227 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 VAV3Q9UKW4 847 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 TBX20Q9UMR3 447 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 USP20Q9Y2K6 914 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 PPME1Q9Y570 386 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 RBM8AQ9Y5S9 174 aaKnown RBP7.57□□□□□ -1.2
MUC1-227ENST00000615517 MYO9AB2RTY4 2548 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 TMEM131Q92545 1883 aa7.57□□□□□ -1.2
MUC1-227ENST00000615517 CYP3A7-CYP3A51PA0A087WV96 503 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 TRABD2BA6NFA1 517 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 TRAPPC3O43617 180 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 GJB3O75712 270 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 CFIP05156 583 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 EDN1P05305 212 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 ARSAP15289 507 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 ITPKAP23677 461 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 CYP3A7P24462 503 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 WEE1P30291 646 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 YWHABP31946 246 aaKnown RBP7.56□□□□□ -1.2
MUC1-227ENST00000615517 P2RY2P41231 377 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 ABCG1P45844 678 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 CYP4F8P98187 520 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 CAMK2BQ13554 666 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 TFDP1Q14186 410 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 PTPAQ15257 358 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 MAPK6Q16659 721 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 FBXO43Q4G163 708 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 CTXN3Q4LDR2 81 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 XKR9Q5GH70 373 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 ANO7Q6IWH7 933 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 LPCAT2Q7L5N7 544 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 TMPRSS7Q7RTY8 843 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 C4orf19Q8IY42 314 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 LSM14AQ8ND56 463 aaKnown RBP7.56□□□□□ -1.2
MUC1-227ENST00000615517 BEST2Q8NFU1 509 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 CNOT6LQ96LI5 555 aaKnown RBP7.56□□□□□ -1.2
MUC1-227ENST00000615517 P2RY13Q9BPV8 354 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 ATXN3LQ9H3M9 355 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 CLMPQ9H6B4 373 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 POLMQ9NP87 494 aaPredicted RBP7.56□□□□□ -1.2
MUC1-227ENST00000615517 DNAAF2Q9NVR5 837 aaKnown RBP7.56□□□□□ -1.2
MUC1-227ENST00000615517 TPCN1Q9ULQ1 816 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 SLC6A14Q9UN76 642 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 GDAQ9Y2T3 454 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 FLNCQ14315 2725 aa7.56□□□□□ -1.2
MUC1-227ENST00000615517 H7C4K7 107 aa7.55□□□□□ -1.2
MUC1-227ENST00000615517 SYN3O14994 580 aa7.55□□□□□ -1.2
MUC1-227ENST00000615517 ZBTB43O43298 467 aa7.55□□□□□ -1.2
MUC1-227ENST00000615517 CBFA2T3O75081 653 aa7.55□□□□□ -1.2
MUC1-227ENST00000615517 P4HBP07237 508 aaKnown RBP7.55□□□□□ -1.2
MUC1-227ENST00000615517 SERPINF2P08697 491 aa7.55□□□□□ -1.2
MUC1-227ENST00000615517 OR4Q2P0C623 313 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms