RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 UVRAGQ9P2Y5 699 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 SMG5Q9UPR3 1016 aaKnown RBP12.41□□□□□ -0.42
CDH5-208ENST00000614547 TNS2Q63HR2 1409 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 CASZ1Q86V15 1759 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 SLITRK3O94933 977 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 MARSP56192 900 aaKnown RBP12.41□□□□□ -0.42
CDH5-208ENST00000614547 TRIP10Q15642 601 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 RNF43Q68DV7 783 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 PRPF39Q86UA1 669 aaKnown RBP12.41□□□□□ -0.42
CDH5-208ENST00000614547 RSPH3Q86UC2 560 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 CEP170P1Q96L14 293 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 NXF1Q9UBU9 619 aaKnown RBP12.41□□□□□ -0.42
CDH5-208ENST00000614547 LRCH1Q9Y2L9 728 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 NCANO14594 1321 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 FAM237BA0A1B0GVD1 139 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 TJP3O95049 919 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 PYGLP06737 847 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 ARL4CP56559 192 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 DARS2Q6PI48 645 aaKnown RBP12.41□□□□□ -0.42
CDH5-208ENST00000614547 ANLNQ9NQW6 1124 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 SLC17A7Q9P2U7 560 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 GSTT1P30711 240 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 LMNB2Q03252 620 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 SLC34A1Q06495 639 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 TMCO4Q5TGY1 634 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 ACAD10Q6JQN1 1059 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 CNKSR1Q969H4 720 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 MCEEQ96PE7 176 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 CSRNP1Q96S65 589 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 TDRD3Q9H7E2 651 aaKnown RBP12.4□□□□□ -0.42
CDH5-208ENST00000614547 DDX18Q9NVP1 670 aaKnown RBP12.4□□□□□ -0.42
CDH5-208ENST00000614547 TXNDC16Q9P2K2 825 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 AHCYL1O43865 530 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 GNA15P30679 374 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 AP2B1P63010 937 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 BMPR2Q13873 1038 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 RASA2Q15283 850 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 ZCCHC23Q6ZST2 131 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 LRRN4Q8WUT4 740 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 PYDC1Q8WXC3 89 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 WDR11Q9BZH6 1224 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 KCNMB3Q9NPA1 279 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 HEY1Q9Y5J3 304 aa12.4□□□□□ -0.42
CDH5-208ENST00000614547 MAGEA13PA6NCF6 341 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 FCHO1O14526 889 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 PDE5AO76074 875 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 ROR2Q01974 943 aaKnown RBP12.4□□□□□ -0.43
CDH5-208ENST00000614547 ASPHQ12797 758 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 NR1H3Q13133 447 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 NUDCD3Q8IVD9 361 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 HIC2Q96JB3 615 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 PAFAH2Q99487 392 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 RANBP17Q9H2T7 1088 aaKnown RBP12.4□□□□□ -0.43
CDH5-208ENST00000614547 UNC45AQ9H3U1 944 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 MRPL47Q9HD33 250 aaKnown RBP12.4□□□□□ -0.43
CDH5-208ENST00000614547 CCPG1Q9ULG6 757 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 ZNF711Q9Y462 761 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.43
CDH5-208ENST00000614547 GTPBP10A4D1E9 387 aaKnown RBP12.39□□□□□ -0.43
CDH5-208ENST00000614547 MEIS2O14770 477 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 PGM3O95394 542 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 PSMG1O95456 288 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 STAT2P52630 851 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 NFX1Q12986 1120 aaKnown RBP12.39□□□□□ -0.43
CDH5-208ENST00000614547 PTK7Q13308 1070 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 SGSM1Q2NKQ1 1148 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 CEP55Q53EZ4 464 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 CYP4A22Q5TCH4 519 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 NXNQ6DKJ4 435 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 ZBTB33Q86T24 672 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 FBXO36Q8NEA4 188 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 PRPF31Q8WWY3 499 aaKnown RBP12.39□□□□□ -0.43
CDH5-208ENST00000614547 CCDC17Q96LX7 622 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 BTBD10Q9BSF8 475 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 MOV10L1Q9BXT6 1211 aaKnown RBP12.39□□□□□ -0.43
CDH5-208ENST00000614547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDH5-208ENST00000614547 FBXO28Q9NVF7 368 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 AKAP11Q9UKA4 1901 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 STAM2O75886 525 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 PYGBP11216 843 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 HOXA7P31268 230 aaPredicted RBP12.39□□□□□ -0.43
CDH5-208ENST00000614547 FMO1Q01740 532 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 MMEL1Q495T6 779 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 CWF19L1Q69YN2 538 aaKnown RBP12.39□□□□□ -0.43
CDH5-208ENST00000614547 CDC42EP5Q6NZY7 148 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 ARHGAP22Q7Z5H3 698 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
CDH5-208ENST00000614547 ATP11CQ8NB49 1132 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 GLIS1Q8NBF1 620 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 USP6NLQ92738 828 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 ATXN7L3BQ96GX2 97 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 LRMDAQ9H2I8 198 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 CLIC5Q9NZA1 410 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 EDF1O60869 148 aaKnown RBP12.39□□□□□ -0.43
CDH5-208ENST00000614547 PSMA2P25787 234 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 TAS2R40P59535 323 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 TRPC3Q13507 836 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 MFSD5Q6N075 450 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 MFSD7Q6UXD7 560 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms