RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ADKP55263 362 aaKnown RBP12.29□□□□□ -0.44
SLIRP-212ENST00000613856 POLR2FP61218 127 aaKnown RBP12.29□□□□□ -0.44
SLIRP-212ENST00000613856 NCOA4Q13772 614 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 ZBTB6Q15916 424 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 PDXDC1Q6P996 788 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 SLC24A5Q71RS6 500 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 CACNA2D4Q7Z3S7 1137 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 ZNF598Q86UK7 904 aaKnown RBP12.29□□□□□ -0.44
SLIRP-212ENST00000613856 ECHDC2Q86YB7 292 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 FMNL3Q8IVF7 1028 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 C1orf127Q8N9H9 656 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 OR8K1Q8NGG5 319 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 CXorf38Q8TB03 319 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 TAF4BQ92750 862 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 SYN2Q92777 582 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-212ENST00000613856 PBXIP1Q96AQ6 731 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 PGBD4Q96DM1 585 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 TRIM44Q96DX7 344 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-212ENST00000613856 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 FAXDC2Q96IV6 333 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 SAMD11Q96NU1 681 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 NT5C1BQ96P26 610 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 APOL6Q9BWW8 343 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 UBN1Q9NPG3 1134 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 PARP2Q9UGN5 583 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 UBQLN1Q9UMX0 589 aaKnown RBP12.29□□□□□ -0.44
SLIRP-212ENST00000613856 FHOD1Q9Y613 1164 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 NRDCO43847 1150 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 GFRA3O60609 400 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 PHACTR2O75167 634 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 STAU1O95793 577 aaKnown RBP12.28□□□□□ -0.44
SLIRP-212ENST00000613856 EOMESO95936 686 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 ASS1P00966 412 aaKnown RBP12.28□□□□□ -0.44
SLIRP-212ENST00000613856 CYP3A5P20815 502 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 JAM2P57087 298 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 FAM189BP81408 668 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 RBM10P98175 930 aaKnown RBP12.28□□□□□ -0.44
SLIRP-212ENST00000613856 APBA1Q02410 837 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 GCNT1Q02742 428 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 SMAD4Q13485 552 aaKnown RBP12.28□□□□□ -0.44
SLIRP-212ENST00000613856 MEA1Q16626 185 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 WDR44Q5JSH3 913 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 IQCEQ6IPM2 695 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 PHLDB3Q6NSJ2 640 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 AGMOQ6ZNB7 445 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 TRIM67Q6ZTA4 783 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 ENOSF1Q7L5Y1 443 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 TMEM139Q8IV31 216 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 BEST2Q8NFU1 509 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 CPLX3Q8WVH0 158 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 MSLNLQ96KJ4 702 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 FAM84AQ96KN4 292 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 ZMAT2Q96NC0 199 aaKnown RBP12.28□□□□□ -0.44
SLIRP-212ENST00000613856 STK33Q9BYT3 514 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 KCNF1Q9H3M0 494 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 ELAC1Q9H777 363 aaKnown RBP12.28□□□□□ -0.44
SLIRP-212ENST00000613856 VRTNQ9H8Y1 702 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 RC3H2Q9HBD1 1191 aaKnown RBP12.28□□□□□ -0.44
SLIRP-212ENST00000613856 CLEC1BQ9P126 229 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 SIX4Q9UIU6 781 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 PLAGL2Q9UPG8 496 aa12.28□□□□□ -0.44
SLIRP-212ENST00000613856 DMDP11532 3685 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 SMIM28A0A1B0GU29 152 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 LRRC53A6NM62 1247 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 C5orf67F2Z3F1 127 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 PTGESO14684 152 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 GLP2RO95838 553 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 PDGFBP01127 241 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-212ENST00000613856 ATICP31939 592 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 PTPN5P54829 565 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 NOP14P78316 857 aaKnown RBP12.27□□□□□ -0.45
SLIRP-212ENST00000613856 CCZ1BP86790 482 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 CCZ1P86791 482 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-212ENST00000613856 CDK17Q00537 523 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 GOLGA8FQ08AF8 430 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 GOLGA8DPQ0D2H9 430 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 TRPC3Q13507 836 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 SGSM1Q2NKQ1 1148 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 RRAGAQ7L523 313 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 RTN4RL1Q86UN2 441 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-212ENST00000613856 ARHGEF19Q8IW93 802 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 HELQQ8TDG4 1101 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 RSPH1Q8WYR4 309 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 JAKMIP2Q96AA8 810 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 PPP1R10Q96QC0 940 aaKnown RBP12.27□□□□□ -0.45
SLIRP-212ENST00000613856 SPAG5Q96R06 1193 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 RPS6KC1Q96S38 1066 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 XYLT2Q9H1B5 865 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 RSAD1Q9HA92 442 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 NLRC4Q9NPP4 1024 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 SLC38A7Q9NVC3 462 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 DPP3Q9NY33 737 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 CD207Q9UJ71 328 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 DNAJC12Q9UKB3 198 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 AJAP1Q9UKB5 411 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-212ENST00000613856 FAM50BQ9Y247 325 aa12.27□□□□□ -0.45
SLIRP-212ENST00000613856 FNDC1Q4ZHG4 1894 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-212ENST00000613856 ARL5CA6NH57 179 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms