RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 PDE6CP51160 858 aa21.66■■□□□ 1.06
CPNE9-205ENST00000613455 CLCNKBP51801 687 aa21.66■■□□□ 1.06
CPNE9-205ENST00000613455 LILRA4P59901 499 aa21.66■■□□□ 1.06
CPNE9-205ENST00000613455 YWHAEP62258 255 aaKnown RBP21.66■■□□□ 1.06
CPNE9-205ENST00000613455 BMS1Q14692 1282 aaKnown RBP21.66■■□□□ 1.06
CPNE9-205ENST00000613455 GLYCTKQ8IVS8 523 aa21.66■■□□□ 1.06
CPNE9-205ENST00000613455 AGPAT1Q99943 283 aa21.66■■□□□ 1.06
CPNE9-205ENST00000613455 PAAF1Q9BRP4 392 aa21.66■■□□□ 1.06
CPNE9-205ENST00000613455 GDAP2Q9NXN4 497 aa21.66■■□□□ 1.06
CPNE9-205ENST00000613455 PCDHB7Q9Y5E2 793 aa21.66■■□□□ 1.06
CPNE9-205ENST00000613455 PODXLO00592 558 aa21.65■■□□□ 1.06
CPNE9-205ENST00000613455 ZSCAN12O43309 604 aa21.65■■□□□ 1.06
CPNE9-205ENST00000613455 INCA1Q0VD86 236 aa21.65■■□□□ 1.06
CPNE9-205ENST00000613455 UPP1Q16831 310 aa21.65■■□□□ 1.06
CPNE9-205ENST00000613455 SV2CQ496J9 727 aa21.65■■□□□ 1.06
CPNE9-205ENST00000613455 NOMO2Q5JPE7 1267 aa21.65■■□□□ 1.06
CPNE9-205ENST00000613455 MFSD5Q6N075 450 aa21.65■■□□□ 1.06
CPNE9-205ENST00000613455 MMS19Q96T76 1030 aa21.65■■□□□ 1.06
CPNE9-205ENST00000613455 KPNA7A9QM74 516 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 B4GALT3O60512 393 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 CILPO75339 1184 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 IPO7O95373 1038 aaKnown RBP21.64■■□□□ 1.06
CPNE9-205ENST00000613455 RPL9P32969 192 aaKnown RBP21.64■■□□□ 1.06
CPNE9-205ENST00000613455 KRT83P78385 493 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 TUSC3Q13454 348 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 SPA17Q15506 151 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 TAF3Q5VWG9 929 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 VPS36Q86VN1 386 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 PALB2Q86YC2 1186 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 RPUSD2Q8IZ73 545 aaKnown RBP21.64■■□□□ 1.06
CPNE9-205ENST00000613455 C3orf58Q8NDZ4 430 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 WHAMMQ8TF30 809 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 HMGXB4Q9UGU5 601 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 NAGPAQ9UK23 515 aa21.64■■□□□ 1.06
CPNE9-205ENST00000613455 FNDC1Q4ZHG4 1894 aaPredicted RBP21.64■■□□□ 1.05
CPNE9-205ENST00000613455 CCP110O43303 1012 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 MMEP08473 750 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 BPIFB4P59827 614 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 FMO1Q01740 532 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 DSC1Q08554 894 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 IKBKEQ14164 716 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 SOWAHAQ2M3V2 549 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 ZNF394Q53GI3 561 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.63■■□□□ 1.05
CPNE9-205ENST00000613455 LIMS2Q7Z4I7 341 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 URGCPQ8TCY9 931 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 RABGGTAQ92696 567 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 TWNKQ96RR1 684 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 FAM124BQ9H5Z6 455 aaPredicted RBP21.63■■□□□ 1.05
CPNE9-205ENST00000613455 TBC1D13Q9NVG8 400 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 RCCD1A6NED2 376 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 GNA15P30679 374 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 GATMP50440 423 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 CDR2Q01850 454 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 NPAS4Q8IUM7 802 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 CASD1Q96PB1 797 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 MRPL45Q9BRJ2 306 aaKnown RBP21.63■■□□□ 1.05
CPNE9-205ENST00000613455 LRFN2Q9ULH4 789 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 TFR2Q9UP52 801 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 PCDHA13Q9Y5I0 950 aa21.63■■□□□ 1.05
CPNE9-205ENST00000613455 DDHD2O94830 711 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 TNFAIP3P21580 790 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 ARHGAP25P42331 645 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 RAD23BP54727 409 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 ALKBH5Q6P6C2 394 aaKnown RBP21.62■■□□□ 1.05
CPNE9-205ENST00000613455 ZNF280BQ86YH2 543 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 TMEM199Q8N511 208 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 PCDHB18PQ96TA0 734 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 ELOVL4Q9GZR5 314 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 BARX2Q9UMQ3 279 aaPredicted RBP21.62■■□□□ 1.05
CPNE9-205ENST00000613455 NME7Q9Y5B8 376 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 COL4A6Q14031 1691 aa21.62■■□□□ 1.05
CPNE9-205ENST00000613455 AARSP49588 968 aaKnown RBP eCLIP21.61■■□□□ 1.05
CPNE9-205ENST00000613455 VAV2P52735 878 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 CD300LGQ6UXG3 332 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 SLC4A11Q8NBS3 891 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 KBTBD7Q8WVZ9 684 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 DDX27Q96GQ7 796 aaKnown RBP21.61■■□□□ 1.05
CPNE9-205ENST00000613455 UROC1Q96N76 676 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 ZSWIM1Q9BR11 485 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 LACRTQ9GZZ8 138 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 SEPT11Q9NVA2 429 aaKnown RBP21.61■■□□□ 1.05
CPNE9-205ENST00000613455 KANSL3Q9P2N6 904 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 L1RE1Q9UN81 338 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 TSC2P49815 1807 aa21.61■■□□□ 1.05
CPNE9-205ENST00000613455 ABL1P00519 1130 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 MAGEA1P43355 309 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 NDST1P52848 882 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 ORC1Q13415 861 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 ZNF677Q86XU0 584 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 DNAAF5Q86Y56 855 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 COLGALT2Q8IYK4 626 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 ABI1Q8IZP0 508 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 TTC39CQ8N584 583 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 TAS2R14Q9NYV8 317 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 ABHD14A-ACY1A0A1B0GW23 586 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 HOXA2O43364 376 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 TACC1O75410 805 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 PAEPP09466 180 aa21.6■■□□□ 1.05
CPNE9-205ENST00000613455 CCDC122Q5T0U0 273 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms