RNA–Protein interactions for RNA: ENST00000613211.1

CCDC144B-207, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 3

Gene CCDC144B, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-207ENST00000613211 NEK11Q8NG66 645 aa12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 ANP32BQ92688 251 aaKnown RBP12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 TIFAQ96CG3 184 aa12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 IGSF21Q96ID5 467 aa12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 NAA15Q9BXJ9 866 aaKnown RBP12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 GANQ9H2C0 597 aa12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 ZNF576Q9H609 170 aa12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 APOBEC3GQ9HC16 384 aaKnown RBP12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 SPG21Q9NZD8 308 aa12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 MYO6Q9UM54 1294 aa12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 NUB1Q9Y5A7 615 aa12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 PCDHB12Q9Y5F1 795 aa12.66□□□□□ -0.38
CCDC144B-207ENST00000613211 FNDC1Q4ZHG4 1894 aaPredicted RBP12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 LINC01553A4QN01 128 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 C5orf67F2Z3F1 127 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 SYN3O14994 580 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 SPTLC1O15269 473 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 HUS1O60921 280 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 LRRN2O75325 713 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 CYP11A1P05108 521 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 RB1P06400 928 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 TYMPP19971 482 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 BMPR1AP36894 532 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 YWHAEP62258 255 aaKnown RBP12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 CUL2Q13617 745 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 TIGD5Q53EQ6 642 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 SCARA3Q6AZY7 606 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 FMNL3Q8IVF7 1028 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 TATDN2Q93075 761 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 SENP8Q96LD8 212 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 PCMTD1Q96MG8 357 aaPredicted RBP12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 PI4K2AQ9BTU6 479 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 STK33Q9BYT3 514 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 TTYH3Q9C0H2 523 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 FAM207AQ9NSI2 230 aaPredicted RBP12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 MARCH5Q9NX47 278 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 CEP72Q9P209 647 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 MSRAQ9UJ68 235 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 DSEQ9UL01 958 aa12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 PRG3Q9Y2Y8 225 aaPredicted RBP12.65□□□□□ -0.38
CCDC144B-207ENST00000613211 TRIP11Q15643 1979 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 GRXCR1A8MXD5 290 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 ODC1P11926 461 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 IGFBP4P22692 258 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 ASPAP45381 313 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 PLCB3Q01970 1234 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 CCDC85BQ15834 202 aaPredicted RBP12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 SOWAHAQ2M3V2 549 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 SPOPLQ6IQ16 392 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 DSTYKQ6XUX3 929 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 DDX53Q86TM3 631 aaKnown RBP12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 RNF168Q8IYW5 571 aaPredicted RBP12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 TMEM130Q8N3G9 435 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 PPM1KQ8N3J5 372 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 APPL2Q8NEU8 664 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 TMEM169Q96HH4 297 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 OXCT2Q9BYC2 517 aaPredicted RBP12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 NUCKS1Q9H1E3 243 aaKnown RBP12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 UBE2TQ9NPD8 197 aaPredicted RBP12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 IMPACTQ9P2X3 320 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 CACNG4Q9UBN1 327 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 NXF1Q9UBU9 619 aaKnown RBP12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 CAPN11Q9UMQ6 739 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 PCDHB8Q9UN66 801 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 CNTN6Q9UQ52 1028 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 LZTS1Q9Y250 596 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 SNX9Q9Y5X1 595 aa12.64□□□□□ -0.39
CCDC144B-207ENST00000613211 PTPRSQ13332 1948 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 LCHNA4D1U4 455 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 CYB561D2O14569 222 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 GABRDO14764 452 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 ITGB1P05556 798 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 TPM1P09493 284 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 FGFR3P22607 806 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 LHX1P48742 406 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 KLK7P49862 253 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 RABGGTBP53611 331 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 POLR2FP61218 127 aaKnown RBP12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 ERVK-21P61565 698 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 KRT17Q04695 432 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 UBE3AQ05086 875 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 LRMPQ12912 555 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 TBX2Q13207 712 aaPredicted RBP12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 IQCEQ6IPM2 695 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 FUT10Q6P4F1 479 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 PDXDC1Q6P996 788 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 PPFIBP1Q86W92 1011 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 UNC93AQ86WB7 457 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 ARHGEF19Q8IW93 802 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 UBR7Q8N806 425 aa12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 ZNF397Q8NF99 534 aaPredicted RBP12.63□□□□□ -0.39
CCDC144B-207ENST00000613211 SHC3Q92529 594 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms