RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 CPB1P15086 417 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 DLG4P78352 724 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 FAM160A1Q05DH4 1040 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 SLC5A9Q2M3M2 681 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 C15orf39Q6ZRI6 1047 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 CCDC149Q6ZUS6 474 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 LRRTM3Q86VH5 581 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 HS6ST3Q8IZP7 471 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 TDRD5Q8NAT2 981 aaKnown RBP13.66□□□□□ -0.22
CSTF1-208ENST00000613138 ATAD1Q8NBU5 361 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 STKLD1Q8NE28 680 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 ZNF461Q8TAF7 563 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 ITFG1Q8TB96 612 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 HDAC7Q8WUI4 952 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 ING5Q8WYH8 240 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 NECTIN4Q96NY8 510 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 TSPAN18Q96SJ8 248 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 CYP4F11Q9HBI6 524 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 TMLHEQ9NVH6 421 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 DMAC2Q9NW81 257 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 ZDHHC7Q9NXF8 308 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 CIZ1Q9ULV3 898 aaPredicted RBP13.66□□□□□ -0.22
CSTF1-208ENST00000613138 L1RE1Q9UN81 338 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.66□□□□□ -0.22
CSTF1-208ENST00000613138 COL4A3Q01955 1670 aa13.66□□□□□ -0.22
CSTF1-208ENST00000613138 PTPRDP23468 1912 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 LRRIQ3A6PVS8 624 aaPredicted RBP13.65□□□□□ -0.22
CSTF1-208ENST00000613138 KPNA7A9QM74 516 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 PRRG1O14668 218 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 PAPLNO95428 1278 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 C1RP00736 705 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 NR3C1P04150 777 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 TYMPP19971 482 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 ACAT1P24752 427 aaKnown RBP13.65□□□□□ -0.22
CSTF1-208ENST00000613138 GBP2P32456 591 aaPredicted RBP13.65□□□□□ -0.22
CSTF1-208ENST00000613138 POU5F1Q01860 360 aaKnown RBP13.65□□□□□ -0.22
CSTF1-208ENST00000613138 PSMD2Q13200 908 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 PSMD6Q15008 389 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 USP37Q86T82 979 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 C12orf56Q8IXR9 622 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 PDCL2Q8N4E4 241 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 TCEAL4Q96EI5 215 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 ANKRD36BP1Q96IX9 119 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 MFSD14AQ96MC6 490 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 CGRRF1Q99675 332 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 LPIN3Q9BQK8 851 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSTF1-208ENST00000613138 CHMP5Q9NZZ3 219 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 CEP72Q9P209 647 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 PCDHA5Q9Y5H7 936 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 INSL5Q9Y5Q6 135 aa13.65□□□□□ -0.22
CSTF1-208ENST00000613138 DENND4CQ5VZ89 1909 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 ZDBF2Q9HCK1 2354 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 MTMR11A4FU01 709 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 KIAA0391O15091 583 aaKnown RBP13.64□□□□□ -0.23
CSTF1-208ENST00000613138 CYP11A1P05108 521 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 MYL1P05976 194 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 ATF2P15336 505 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 GJA1P17302 382 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 TNNI1P19237 187 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 ANP32AP39687 249 aaKnown RBP13.64□□□□□ -0.23
CSTF1-208ENST00000613138 CCR2P41597 374 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
CSTF1-208ENST00000613138 TWF1Q12792 350 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 DUSP4Q13115 394 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 KCNB1Q14721 858 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 SV2CQ496J9 727 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 SLC39A12Q504Y0 691 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 C1orf220Q5T0J3 134 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 CEP135Q66GS9 1140 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 TRAPPC11Q7Z392 1133 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 NT5DC4Q86YG4 428 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 CACTINQ8WUQ7 758 aaKnown RBP13.64□□□□□ -0.23
CSTF1-208ENST00000613138 LRFN3Q9BTN0 628 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 RPP25Q9BUL9 199 aaKnown RBP13.64□□□□□ -0.23
CSTF1-208ENST00000613138 C1QTNF1Q9BXJ1 281 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 ITGA11Q9UKX5 1188 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 NR2E1Q9Y466 385 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 SNX9Q9Y5X1 595 aa13.64□□□□□ -0.23
CSTF1-208ENST00000613138 OBSL1O75147 1896 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 GREB1Q4ZG55 1949 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 ARHGEF37A1IGU5 675 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 TRIM49BA6NDI0 452 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 PDXKO00764 312 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 NARSO43776 548 aaKnown RBP13.63□□□□□ -0.23
CSTF1-208ENST00000613138 ATP2C2O75185 946 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 LRRN2O75325 713 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 PDGFBP01127 241 aaPredicted RBP13.63□□□□□ -0.23
CSTF1-208ENST00000613138 TNNC2P02585 160 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 TRIM49P0CI25 452 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 TRIM49CP0CI26 452 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 ALADP13716 330 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
CSTF1-208ENST00000613138 CEBPBP17676 345 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 FSHRP23945 695 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 ELF1P32519 619 aa13.63□□□□□ -0.23
CSTF1-208ENST00000613138 PRCPP42785 496 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms