RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 SIK2Q9H0K1 926 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ATP5HO75947 161 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LBPP18428 481 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CDC25AP30304 524 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DSG3P32926 999 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CCT3P49368 545 aaKnown RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EML3Q32P44 896 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DNAJC9Q8WXX5 260 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TSSK1BQ9BXA7 367 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KRCC1Q9NPI7 259 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ALG6Q9Y672 507 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 AP1M2Q9Y6Q5 423 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CASC3O15234 703 aaKnown RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KPNA6O60684 536 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CHGBP05060 677 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CHMP24386 653 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 POU1F1P28069 291 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 INTS6LQ5JSJ4 861 aaKnown RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 C6orf10Q5SRN2 563 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ZNF57Q68EA5 555 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CACUL1Q86Y37 369 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CNBD2Q96M20 576 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TSC22D3Q99576 134 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MUC3BQ9H195 1237 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DNALI1O14645 258 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PRRG1O14668 218 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GPC1P35052 558 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 POLD3Q15054 466 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ZCCHC8Q6NZY4 707 aaKnown RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 USP51Q70EK9 711 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MICU2Q8IYU8 434 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DAW1Q8N136 415 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RELTQ969Z4 430 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 NYXQ9GZU5 481 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 BCAS1O75363 584 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IL9RQ01113 521 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HIST1H2AHQ96KK5 128 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HIST1H2AJQ99878 128 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HAUS4Q9H6D7 363 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SPTLC3Q9NUV7 552 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FAM118AQ9NWS6 357 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TRPM5Q9NZQ8 1165 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 XPR1Q9UBH6 696 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GDAQ9Y2T3 454 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GCC2Q8IWJ2 1684 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CYP2E1P05181 493 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ACADLP28330 430 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LRP8Q14114 963 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CCDC153Q494R4 210 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 C6orf118Q5T5N4 469 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SLAIN1Q8ND83 568 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 NSL1Q96IY1 281 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FKBP14Q9NWM8 211 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HEY1Q9Y5J3 304 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 BCORL1Q5H9F3 1711 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IGSF1Q8N6C5 1336 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 C15orf38-AP3S2A0A0A6YYH1 394 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MTSS1O43312 755 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SPAG7O75391 227 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EGFRP00533 1210 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 AXLP30530 894 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GNGT1P63211 74 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PPP2CAP67775 309 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 UBXN2AP68543 259 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KIF23Q02241 960 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TMC5Q6UXY8 1006 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 C2CD5Q86YS7 1000 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SUGP1Q8IWZ8 645 aaKnown RBP11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RCOR2Q8IZ40 523 aa11.31□□□□□ -0.6
CNTNAP3B-211ENST00000612828 UNC13AQ9UPW8 1703 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KDM5DQ9BY66 1539 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SH3TC1Q8TE82 1336 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ALOX15P16050 662 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SLC39A14Q15043 492 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ALKBH5Q6P6C2 394 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RASSF3Q86WH2 238 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CACTIN-AS1Q8N1I8 211 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CINPQ9BW66 212 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SAE1Q9UBE0 346 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EPHB4P54760 987 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IFT88Q13099 833 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FAAH2Q6GMR7 532 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 OR6B2Q6IFH4 312 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ACAD11Q709F0 780 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 OR6B3Q8NGW1 331 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SCFD2Q8WU76 684 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 NUP85Q9BW27 656 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 VPS11Q9H270 941 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 COPS7BQ9H9Q2 264 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TMEM138Q9NPI0 162 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MRPL40Q9NQ50 206 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LRRIQ3A6PVS8 624 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PAK2Q13177 524 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms