RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 EZH1Q92800 747 aaPredicted RBP7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TMEM143Q96AN5 459 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ZNF512Q96ME7 567 aaPredicted RBP7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TPSD1Q9BZJ3 242 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 UNC45AQ9H3U1 944 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 OBP2AQ9NY56 170 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 KIAA1522Q9P206 1035 aaPredicted RBP7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PILRBQ9UKJ0 227 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SLC6A14Q9UN76 642 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SNX14Q9Y5W7 946 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TAF6LQ9Y6J9 622 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 KNTC1P50748 2209 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 KIAA1549LQ6ZVL6 1849 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NUP210Q8TEM1 1887 aaPredicted RBP7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 A0A1W2PRU2 124 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DDX11L8A8MPP1 907 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TMEM189-UBE2V1I3L0A0 370 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PRC1O43663 620 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GJB3O75712 270 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ERLIN2O94905 339 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 WISP1O95388 367 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NTRK1P04629 796 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CALM1P0DP23 149 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CALM2P0DP24 149 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CALM3P0DP25 149 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ARF4P18085 180 aaPredicted RBP7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RXRAP19793 462 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GALK1P51570 392 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 JAK3P52333 1124 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RCAN1P53805 252 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NAPAP54920 295 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PTENP60484 403 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PLCB2Q00722 1185 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 EXOSC10Q01780 885 aaKnown RBP7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TWF1Q12792 350 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PCBP1Q15365 356 aaKnown RBP eCLIP7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 JAKMIP3Q5VZ66 844 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PPP1R18Q6NYC8 613 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 BLOC1S2Q6QNY1 142 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 B3GNT9Q6UX72 402 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TMTC3Q6ZXV5 915 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GLRX5Q86SX6 157 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SGMS1Q86VZ5 419 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TMC8Q8IU68 726 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 HACE1Q8IYU2 909 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MINDY1Q8N5J2 469 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RNF149Q8NC42 400 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 OR2I1PQ8NGU4 316 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RPLP0P6Q8NHW5 317 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 OLIG1Q8TAK6 271 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CNOT6LQ96LI5 555 aaKnown RBP7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FNBP1Q96RU3 617 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RIT2Q99578 217 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FAM83CQ9BQN1 747 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 JPH2Q9BR39 696 aaPredicted RBP7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GTPBP2Q9BX10 602 aaKnown RBP7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SLITRK6Q9H5Y7 841 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DHX33Q9H6R0 707 aaKnown RBP7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CAPN10Q9HC96 672 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RTN4Q9NQC3 1192 aaKnown RBP7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 HPS4Q9NQG7 708 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ASAH2Q9NR71 780 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DNAAF2Q9NVR5 837 aaKnown RBP7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PARP2Q9UGN5 583 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 KALRNO60229 2985 aa7.93□□□□□ -1.14
PTCHD3P1-201ENST00000612350 HELZP42694 1942 aaKnown RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CEP192Q8TEP8 1941 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CCDC69A6NI79 296 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SH2B2O14492 632 aaPredicted RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MSH4O15457 936 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ASAP2O43150 1006 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CHMP2AO43633 222 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CBFA2T3O75081 653 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DKK1O94907 266 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NPTXRO95502 500 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 THP07101 528 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DRD1P21728 446 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RPS6KB1P23443 525 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ATXN3P54252 364 aaPredicted RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NPEPPSP55786 919 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SLC14A1Q13336 389 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PTPAQ15257 358 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ADCK5Q3MIX3 580 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FBXO43Q4G163 708 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PLA2G4FQ68DD2 849 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NAIF1Q69YI7 327 aaPredicted RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SYNE3Q6ZMZ3 975 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RUFY3Q7L099 469 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ARMCX6Q7L4S7 300 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 LPCAT2Q7L5N7 544 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FERMT3Q86UX7 667 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CDR2LQ86X02 465 aaPredicted RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ELMOD1Q8N336 334 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FRMD1Q8N878 549 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FAM181AQ8N9Y4 354 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TSTD1Q8NFU3 115 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RDM1Q8NG50 284 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 BPIFB1Q8TDL5 484 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PSPC1Q8WXF1 523 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms