RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 DOCK6Q96HP0 2047 aa28.05■■■□□ 2.08
VEGFA-226ENST00000611736 PRKD2Q9BZL6 878 aa28.05■■■□□ 2.08
VEGFA-226ENST00000611736 PIDD1Q9HB75 910 aa28.05■■■□□ 2.08
VEGFA-226ENST00000611736 TRAF3IP3Q9Y228 551 aa28.05■■■□□ 2.08
VEGFA-226ENST00000611736 R3HCC1Q9Y3T6 440 aaKnown RBP28.05■■■□□ 2.08
VEGFA-226ENST00000611736 LOC730098B7Z3J9 87 aa28.04■■■□□ 2.08
VEGFA-226ENST00000611736 CPB1P15086 417 aa28.04■■■□□ 2.08
VEGFA-226ENST00000611736 CASP4P49662 377 aa28.04■■■□□ 2.08
VEGFA-226ENST00000611736 CEP135Q66GS9 1140 aa28.04■■■□□ 2.08
VEGFA-226ENST00000611736 LRRC52Q8N7C0 313 aa28.04■■■□□ 2.08
VEGFA-226ENST00000611736 SPATA20Q8TB22 786 aa28.04■■■□□ 2.08
VEGFA-226ENST00000611736 DSEQ9UL01 958 aa28.04■■■□□ 2.08
VEGFA-226ENST00000611736 CCL16O15467 120 aa28.03■■■□□ 2.08
VEGFA-226ENST00000611736 ABLIM3O94929 683 aa28.03■■■□□ 2.08
VEGFA-226ENST00000611736 CYP11A1P05108 521 aa28.03■■■□□ 2.08
VEGFA-226ENST00000611736 OR4Q2P0C623 313 aa28.03■■■□□ 2.08
VEGFA-226ENST00000611736 ELF1P32519 619 aa28.03■■■□□ 2.08
VEGFA-226ENST00000611736 ZNF658Q5TYW1 1059 aaPredicted RBP28.03■■■□□ 2.08
VEGFA-226ENST00000611736 WSCD1Q658N2 575 aa28.03■■■□□ 2.08
VEGFA-226ENST00000611736 METTL23Q86XA0 190 aa28.03■■■□□ 2.08
VEGFA-226ENST00000611736 ELOA2Q8IYF1 753 aaPredicted RBP28.03■■■□□ 2.08
VEGFA-226ENST00000611736 PLEKHO2Q8TD55 490 aa28.03■■■□□ 2.08
VEGFA-226ENST00000611736 TMEM174Q8WUU8 243 aa28.03■■■□□ 2.08
VEGFA-226ENST00000611736 IPO9Q96P70 1041 aaKnown RBP28.03■■■□□ 2.08
VEGFA-226ENST00000611736 GZF1Q9H116 711 aaPredicted RBP28.03■■■□□ 2.08
VEGFA-226ENST00000611736 DENND4AQ7Z401 1863 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 OR6C75A6NL08 312 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 PRRG1O14668 218 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 NR2F2P24468 414 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 MYBPC2Q14324 1141 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 CYP26C1Q6V0L0 522 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 CCDC149Q6ZUS6 474 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 TRAPPC11Q7Z392 1133 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 KHSRPQ92945 711 aaKnown RBP eCLIP28.02■■■□□ 2.081e-9■■■□□ 15.1
VEGFA-226ENST00000611736 OXCT2Q9BYC2 517 aaPredicted RBP28.02■■■□□ 2.08
VEGFA-226ENST00000611736 FRMD4BQ9Y2L6 1034 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 NR2E1Q9Y466 385 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 TRIOO75962 3097 aa28.02■■■□□ 2.08
VEGFA-226ENST00000611736 HNRNPA1P09651 372 aaKnown RBP eCLIP28.01■■■□□ 2.07
VEGFA-226ENST00000611736 ATF2P15336 505 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 PRCPP42785 496 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 TPGS2Q68CL5 300 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 ISM2Q6H9L7 571 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 RNF19BQ6ZMZ0 732 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 ZNF516Q92618 1163 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 HPDLQ96IR7 371 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 TMEM209Q96SK2 561 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 RHOBTB2Q9BYZ6 727 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 CYP4F11Q9HBI6 524 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 MAN1B1Q9UKM7 699 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 POLIQ9UNA4 740 aa28.01■■■□□ 2.07
VEGFA-226ENST00000611736 C2CD4DB7Z1M9 353 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 PAPLNO95428 1278 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 SEC24AO95486 1093 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 ADCY1Q08828 1119 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 MYO1EQ12965 1108 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 NFIL3Q16649 462 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 UVSSAQ2YD98 709 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 OR10T2Q8NGX3 314 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 PGLYRP2Q96PD5 576 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 WDR6Q9NNW5 1121 aaKnown RBP28■■■□□ 2.07
VEGFA-226ENST00000611736 AFF4Q9UHB7 1163 aaKnown RBP28■■■□□ 2.07
VEGFA-226ENST00000611736 SNX9Q9Y5X1 595 aa28■■■□□ 2.07
VEGFA-226ENST00000611736 CLUHO75153 1309 aa27.99■■■□□ 2.07
VEGFA-226ENST00000611736 LRRIQ3A6PVS8 624 aaPredicted RBP27.99■■■□□ 2.07
VEGFA-226ENST00000611736 RPL13P26373 211 aaKnown RBP27.99■■■□□ 2.07
VEGFA-226ENST00000611736 HOXA9P31269 272 aa27.99■■■□□ 2.07
VEGFA-226ENST00000611736 ZCWPW2Q504Y3 356 aa27.99■■■□□ 2.07
VEGFA-226ENST00000611736 RNF135Q8IUD6 432 aa27.99■■■□□ 2.07
VEGFA-226ENST00000611736 THEM5Q8N1Q8 247 aa27.99■■■□□ 2.07
VEGFA-226ENST00000611736 PDCL2Q8N4E4 241 aa27.99■■■□□ 2.07
VEGFA-226ENST00000611736 PARD3BQ8TEW8 1205 aa27.99■■■□□ 2.07
VEGFA-226ENST00000611736 RTP3Q9BQQ7 232 aa27.99■■■□□ 2.07
VEGFA-226ENST00000611736 L1RE1Q9UN81 338 aa27.99■■■□□ 2.07
VEGFA-226ENST00000611736 HUS1O60921 280 aa27.98■■■□□ 2.07
VEGFA-226ENST00000611736 XYLBO75191 536 aa27.98■■■□□ 2.07
VEGFA-226ENST00000611736 GRASPQ7Z6J2 395 aaPredicted RBP27.98■■■□□ 2.07
VEGFA-226ENST00000611736 TCEAL8Q8IYN2 117 aa27.98■■■□□ 2.07
VEGFA-226ENST00000611736 TDRD5Q8NAT2 981 aaKnown RBP27.98■■■□□ 2.07
VEGFA-226ENST00000611736 GTPBP4Q9BZE4 634 aaKnown RBP27.98■■■□□ 2.07
VEGFA-226ENST00000611736 GDAP2Q9NXN4 497 aa27.98■■■□□ 2.07
VEGFA-226ENST00000611736 PHACTR2O75167 634 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 AKAP3O75969 853 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 CST3P01034 146 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-226ENST00000611736 DLG4P78352 724 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 NTHL1P78549 312 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 GPR17Q13304 367 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 ADAM9Q13443 819 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 BIRC3Q13489 604 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 COBLL1Q53SF7 1204 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 RTL10Q7L3V2 364 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 MUTYHQ9UIF7 546 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 INSL5Q9Y5Q6 135 aa27.97■■■□□ 2.07
VEGFA-226ENST00000611736 MYO10Q9HD67 2058 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 BIN1O00499 593 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 VNN2O95498 520 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 LRG1P02750 347 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 CDR1P51861 262 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 TRPC3Q13507 836 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 EDRF1Q3B7T1 1238 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms