RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 SLC39A4Q6P5W5 647 aa23.56■■□□□ 1.36
CBWD3-207ENST00000611426 PDZD4Q76G19 769 aaPredicted RBP23.56■■□□□ 1.36
CBWD3-207ENST00000611426 MAP4K3Q8IVH8 894 aa23.56■■□□□ 1.36
CBWD3-207ENST00000611426 ZNF512Q96ME7 567 aaPredicted RBP23.56■■□□□ 1.36
CBWD3-207ENST00000611426 OXCT2Q9BYC2 517 aaPredicted RBP23.56■■□□□ 1.36
CBWD3-207ENST00000611426 FAM13BQ9NYF5 915 aa23.56■■□□□ 1.36
CBWD3-207ENST00000611426 CPSF3Q9UKF6 684 aaKnown RBP23.56■■□□□ 1.36
CBWD3-207ENST00000611426 ECI2O75521 394 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 CEBPBP17676 345 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 SLC44A4Q53GD3 710 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 PRSS36Q5K4E3 855 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 SPATA1Q5VX52 437 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 RNF19BQ6ZMZ0 732 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 DYMQ7RTS9 669 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 ASCL5Q7RTU5 278 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 BEST2Q8NFU1 509 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 FOXQ1Q9C009 403 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 TSPY26PQ9H489 355 aa23.55■■□□□ 1.36
CBWD3-207ENST00000611426 ANKRD63C9JTQ0 380 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 AARSP49588 968 aaKnown RBP eCLIP23.54■■□□□ 1.36
CBWD3-207ENST00000611426 ACOT2P49753 483 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 TWF1Q12792 350 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 RRAGBQ5VZM2 374 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 JADE1Q6IE81 842 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 SLFN12LQ6IEE8 588 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 PJA1Q8NG27 643 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 NKD2Q969F2 451 aaPredicted RBP23.54■■□□□ 1.36
CBWD3-207ENST00000611426 TCEAL4Q96EI5 215 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 ST6GALNAC4Q9H4F1 302 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 STK17AQ9UEE5 414 aa23.54■■□□□ 1.36
CBWD3-207ENST00000611426 PRR23AA6NEV1 266 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 PPEF2O14830 753 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 MICAL2O94851 1124 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 TXLNAP40222 546 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 PRKCQQ04759 706 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 MLF2Q15773 248 aaPredicted RBP23.53■■□□□ 1.36
CBWD3-207ENST00000611426 POTEHQ6S545 545 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 ZNF720Q7Z2F6 126 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 PYM1Q9BRP8 204 aaKnown RBP23.53■■□□□ 1.36
CBWD3-207ENST00000611426 PLA2G2FQ9BZM2 168 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 CEP72Q9P209 647 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 CFAP54Q96N23 3096 aa23.53■■□□□ 1.36
CBWD3-207ENST00000611426 KANSL1LA0AUZ9 987 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 OR6C75A6NL08 312 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 TISP43B9A030 160 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 OR4Q2P0C623 313 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 CCR2P41597 374 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 LILRA4P59901 499 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 TMEM132DQ14C87 1099 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 TANGO2Q6ICL3 276 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 OVOS1Q6IE37 1185 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 SV2BQ7L1I2 683 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 SFR1Q86XK3 245 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 HS6ST3Q8IZP7 471 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 ELSPBP1Q96BH3 223 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 PGLYRP2Q96PD5 576 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 DLGAP2Q9P1A6 1054 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 USP25Q9UHP3 1055 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 AGO2Q9UKV8 859 aaKnown RBP23.52■■□□□ 1.36
CBWD3-207ENST00000611426 DERAQ9Y315 318 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 PTPRZ1P23471 2315 aaPredicted RBP23.52■■□□□ 1.36
CBWD3-207ENST00000611426 RIF1Q5UIP0 2472 aaKnown RBP23.52■■□□□ 1.36
CBWD3-207ENST00000611426 NFICP08651 508 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 CCDC192P0DO97 292 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 TYMPP19971 482 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 PAX3P23760 479 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 CAMK4Q16566 473 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 C9orf57Q5W0N0 161 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 SENP8Q96LD8 212 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 ASB7Q9H672 318 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 GRPEL1Q9HAV7 217 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 ASAH2Q9NR71 780 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 STYXL1Q9Y6J8 313 aa23.52■■□□□ 1.36
CBWD3-207ENST00000611426 MYMKA6NI61 221 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 ODC1P11926 461 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 MYL4P12829 197 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 DEKP35659 375 aaKnown RBP23.51■■□□□ 1.35
CBWD3-207ENST00000611426 DUSP4Q13115 394 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 GPR17Q13304 367 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 FAM78AQ5JUQ0 283 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 LEMD2Q8NC56 503 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 HVCN1Q96D96 273 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 DDX23Q9BUQ8 820 aaKnown RBP23.51■■□□□ 1.35
CBWD3-207ENST00000611426 MRPL44Q9H9J2 332 aaKnown RBP23.51■■□□□ 1.35
CBWD3-207ENST00000611426 ZFP14Q9HCL3 533 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 SEL1LQ9UBV2 794 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 YIPF1Q9Y548 306 aa23.51■■□□□ 1.35
CBWD3-207ENST00000611426 WDR87Q6ZQQ6 2873 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 PIRO00625 290 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 LRRN2O75325 713 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 CAVIN2O95810 425 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 GLULP15104 373 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 PLD1Q13393 1074 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 UBXN2BQ14CS0 331 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 ARMCX5Q6P1M9 558 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 KRBA2Q6ZNG9 492 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 C1orf210Q8IVY1 113 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 POMGNT1Q8WZA1 660 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 IKZF4Q9H2S9 585 aa23.5■■□□□ 1.35
CBWD3-207ENST00000611426 C2CD2Q9Y426 696 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms