RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 CYP2W1Q8TAV3 490 aa14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 HACD3Q9P035 362 aa14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 USP15Q9Y4E8 981 aaPredicted RBP14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 E5RI56 91 aa14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 PRLRP16471 622 aa14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 GOLGA7BQ2TAP0 167 aa14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 C3orf62Q6ZUJ4 267 aa14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 KLF6Q99612 283 aaPredicted RBP14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 KATNAL1Q9BW62 490 aa14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 ROPN1BQ9BZX4 212 aaPredicted RBP14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 ROPN1Q9HAT0 212 aaPredicted RBP14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 PAK5Q9P286 719 aa14.96□□□□□ -0.01
PCDHB16-201ENST00000609684 C3orf70A6NLC5 250 aaPredicted RBP14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 F8VZ95 297 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 OGTO15294 1046 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 CYP11B1P15538 503 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 PHEXP78562 749 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 USP33Q8TEY7 942 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 ARL8AQ96BM9 186 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 POP1Q99575 1024 aaKnown RBP14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 TRIM15Q9C019 465 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 DDX4Q9NQI0 724 aaKnown RBP14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 ANLNQ9NQW6 1124 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 MAP3K20Q9NYL2 800 aaKnown RBP14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 LMCD1Q9NZU5 365 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 VCAM1P19320 739 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 FNTAP49354 379 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 POLE2P56282 527 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 DEUP1Q05D60 604 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 CCL15Q16663 113 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 ICE2Q659A1 982 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 GIPC2Q8TF65 315 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 SLC16A10Q8TF71 515 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 L3MBTL1Q9Y468 752 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 WTIPA6NIX2 430 aaPredicted RBP14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 SUPT20HL2P0C7V6 817 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 LAMC2Q13753 1193 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 RMDN1Q96DB5 314 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 TSSK1BQ9BXA7 367 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 MTMR12Q9C0I1 747 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 MRPL46Q9H2W6 279 aaKnown RBP14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 NPHS2Q9NP85 383 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 OSGEPQ9NPF4 335 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 KRT82Q9NSB4 513 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 KLC4Q9NSK0 619 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 EEF2KO00418 725 aaKnown RBP14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 CYTH3O43739 400 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 NPTXRO95502 500 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 PLA2G4AP47712 749 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 PTK7Q13308 1070 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 RPAINQ86UA6 219 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 TAS1R2Q8TE23 839 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 ATG4AQ8WYN0 398 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 NUDT12Q9BQG2 462 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 ADA2Q9NZK5 511 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 TJP2Q9UDY2 1190 aa14.95□□□□□ -0.02
PCDHB16-201ENST00000609684 PCNX4Q63HM2 1172 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 MTHFD1LQ6UB35 978 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 RFX8Q6ZV50 586 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 FAM71DQ8N9W8 422 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 SYTL5Q8TDW5 730 aaPredicted RBP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 ULK4Q96C45 1275 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 PDCD2LQ9BRP1 358 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 OLFML3Q9NRN5 406 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 DMGDHQ9UI17 866 aaKnown RBP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 GAS2O43903 313 aaKnown RBP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 RPS6KA5O75582 802 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 ZNF189O75820 626 aaPredicted RBP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 NAMPTP43490 491 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 DCAF6Q58WW2 860 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 ST13P4Q8IZP2 240 aaPredicted RBP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 SEC16BQ96JE7 1060 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 TRAPPC3O43617 180 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 HOXD10P28358 340 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 NCLNQ969V3 563 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 CCDC124Q96CT7 223 aaKnown RBP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 RMDN2Q96LZ7 410 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 SLC4A9Q96Q91 983 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 PCMTD2Q9NV79 361 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 SMIM22K7EJ46 135 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 GARTP22102 1010 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 CLCN3P51790 818 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 DGKDQ16760 1214 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 ANGPTL8Q6UXH0 198 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 DNAAF5Q86Y56 855 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 GTF3C2Q8WUA4 911 aaPredicted RBP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 PPCSQ9HAB8 311 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 MARCOQ9UEW3 520 aaPredicted RBP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 TSR3Q9UJK0 312 aaKnown RBP14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 PPME1Q9Y570 386 aa14.94□□□□□ -0.02
PCDHB16-201ENST00000609684 FAM86B1E9PN63 330 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 FAM86B2P0C5J1 330 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 KDSRQ06136 332 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 ORC1Q13415 861 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 SV2CQ496J9 727 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 PPHLN1Q8NEY8 458 aaKnown RBP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 SLC20A1Q8WUM9 679 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 CYFIP2Q96F07 1278 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms