RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SPIRE2Q8WWL2 714 aa23.63■■□□□ 1.37
SHANK2-220ENST00000608988 GRID1Q9ULK0 1009 aa23.63■■□□□ 1.37
SHANK2-220ENST00000608988 THSD7AQ9UPZ6 1657 aa23.63■■□□□ 1.37
SHANK2-220ENST00000608988 POC1B-GALNT4F8VUJ3 575 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 DHX15O43143 795 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 TSHRP16473 764 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 YWHABP31946 246 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 SARNPP82979 210 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 OCRLQ01968 901 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 C1QBPQ07021 282 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 NFX1Q12986 1120 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 SLC1A5Q15758 541 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 STRIP1Q5VSL9 837 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 C4orf50Q6ZRC1 276 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 CLNKQ7Z7G1 428 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 TMEM161BQ8NDZ6 487 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 MMADHCQ9H3L0 296 aaPredicted RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 C17orf75Q9HAS0 396 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 TBC1D22BQ9NU19 505 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 HERC5Q9UII4 1024 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 POLRMTO00411 1230 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 NVLO15381 856 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 DNAJC6O75061 913 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 ITGB5P18084 799 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 GARTP22102 1010 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 GEMIN4P57678 1058 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 TAS2R40P59535 323 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 ZNF449Q6P9G9 518 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 PRUNE1Q86TP1 453 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 SPOCK2Q92563 424 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 ZNF333Q96JL9 665 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 YIPF3Q9GZM5 350 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 VPS11Q9H270 941 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 VPS37BQ9H9H4 285 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 AGO4Q9HCK5 861 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 KCNH7Q9NS40 1196 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 IP6K2Q9UHH9 426 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 LRCH1Q9Y2L9 728 aa23.62■■□□□ 1.37
SHANK2-220ENST00000608988 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.62■■□□□ 1.37
SHANK2-220ENST00000608988 DPPA5A6NC42 116 aa23.61■■□□□ 1.37
SHANK2-220ENST00000608988 PECAM1P16284 738 aaPredicted RBP23.61■■□□□ 1.37
SHANK2-220ENST00000608988 CDC25CP30307 473 aa23.61■■□□□ 1.37
SHANK2-220ENST00000608988 ABCD1P33897 745 aa23.61■■□□□ 1.37
SHANK2-220ENST00000608988 MAMLD1Q13495 774 aa23.61■■□□□ 1.37
SHANK2-220ENST00000608988 CTC1Q2NKJ3 1217 aa23.61■■□□□ 1.37
SHANK2-220ENST00000608988 LVRNQ6Q4G3 990 aa23.61■■□□□ 1.37
SHANK2-220ENST00000608988 C15orf39Q6ZRI6 1047 aa23.61■■□□□ 1.37
SHANK2-220ENST00000608988 CPA5Q8WXQ8 436 aa23.61■■□□□ 1.37
SHANK2-220ENST00000608988 TMX4Q9H1E5 349 aaPredicted RBP23.61■■□□□ 1.37
SHANK2-220ENST00000608988 ZMYND8Q9ULU4 1186 aaPredicted RBP23.61■■□□□ 1.37
SHANK2-220ENST00000608988 NPR1P16066 1061 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 JAG1P78504 1218 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 MXRA7P84157 204 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 DMP1Q13316 513 aaPredicted RBP23.6■■□□□ 1.37
SHANK2-220ENST00000608988 MUM1Q2TAK8 710 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 RNASEH2BQ5TBB1 312 aaKnown RBP23.6■■□□□ 1.37
SHANK2-220ENST00000608988 MFN1Q8IWA4 741 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 GPD1LQ8N335 351 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 NKD2Q969F2 451 aaPredicted RBP23.6■■□□□ 1.37
SHANK2-220ENST00000608988 TSC22D3Q99576 134 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 NTPCRQ9BSD7 190 aaKnown RBP23.6■■□□□ 1.37
SHANK2-220ENST00000608988 BTBD10Q9BSF8 475 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 PCDH9Q9HC56 1237 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.6■■□□□ 1.37
SHANK2-220ENST00000608988 UBIAD1Q9Y5Z9 338 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 DDX39AO00148 427 aaKnown RBP23.6■■□□□ 1.37
SHANK2-220ENST00000608988 TGDSO95455 350 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 CBX6O95503 412 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 IL1BP01584 269 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 ITGAVP06756 1048 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 GSTA2P09210 222 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 SKIP12755 728 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 PEX19P40855 299 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 ARSEP51690 589 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 KRT72Q14CN4 511 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 RBBP5Q15291 538 aaKnown RBP23.6■■□□□ 1.37
SHANK2-220ENST00000608988 KLHL38Q2WGJ6 581 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 WDR44Q5JSH3 913 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 SLC30A9Q6PML9 568 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 C4orf33Q8N1A6 199 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 DHRS4Q9BTZ2 278 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 FRMD8P1Q9BZ68 369 aaPredicted RBP23.6■■□□□ 1.37
SHANK2-220ENST00000608988 ZNF148Q9UQR1 794 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 ASB3Q9Y575 518 aa23.6■■□□□ 1.37
SHANK2-220ENST00000608988 SMAPO00193 183 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 JAK3P52333 1124 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 RBM5P52756 815 aaKnown RBP eCLIP23.59■■□□□ 1.372e-6■■□□□ 14.1
SHANK2-220ENST00000608988 PSMC5P62195 406 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 CLDN10P78369 228 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 GPS1Q13098 491 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 SEPT7Q16181 437 aaKnown RBP23.59■■□□□ 1.37
SHANK2-220ENST00000608988 AP1ARQ63HQ0 302 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 FAM91A1Q658Y4 838 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 ZFAND2BQ8WV99 257 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 FAM136AQ96C01 138 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 SLITRK1Q96PX8 696 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 PARVAQ9NVD7 372 aa23.59■■□□□ 1.37
SHANK2-220ENST00000608988 MTO1Q9Y2Z2 717 aaKnown RBP23.59■■□□□ 1.37
SHANK2-220ENST00000608988 HAUS5O94927 633 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 ALDH1B1P30837 517 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms