RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PIM1P11309 404 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 CDH2P19022 906 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 ACTR3P61158 418 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 SPIDRQ14159 915 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 GK3PQ14409 553 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 KRT72Q14CN4 511 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 TLR1Q15399 786 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 TRIP13Q15645 432 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 LRRC55Q6ZSA7 311 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 FASTKD5Q7L8L6 764 aaKnown RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 GALNT4Q8N4A0 578 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 POU5F2Q8N7G0 328 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 GSTCDQ8NEC7 633 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 SLC35G2Q8TBE7 412 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 ZNF75CPQ92670 426 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 SH3GL1Q99961 368 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■□□□□ 10.8
CTCFL-218ENST00000608440 ANKRD2Q9GZV1 360 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 ZDHHC7Q9NXF8 308 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 DKK3Q9UBP4 350 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 VPS51Q9UID3 782 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 FLT1P17948 1338 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 ZNF532Q9HCE3 1301 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 TCRBV7S2A1N4TA0A589 114 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 PDE8AO60658 829 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 CDH16O75309 829 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 NTSR2O95665 410 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 CHRNA3P32297 505 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 ADD2P35612 726 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 KDSRQ06136 332 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 KRT81Q14533 505 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 PARP10Q53GL7 1025 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 SPDYAQ5MJ70 313 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 C10orf76Q5T2E6 689 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 ARL6IP4Q66PJ3 421 aaKnown RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 OGFOD2Q6N063 350 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 NET1Q7Z628 596 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 ULK2Q8IYT8 1036 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 RBM15BQ8NDT2 890 aaKnown RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 RAB3IL1Q8TBN0 382 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 SLC26A7Q8TE54 656 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 FAM172AQ8WUF8 416 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 C9orf72Q96LT7 481 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 PAIP1Q9H074 479 aaKnown RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 EPB41L4AQ9HCS5 686 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 GPR108Q9NPR9 543 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 BAZ2BQ9UIF8 2168 aaKnown RBP13.23□□□□□ -0.29
CTCFL-218ENST00000608440 CAPN8A6NHC0 703 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 MUTP22033 750 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 RAP1GDS1P52306 607 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 GALCP54803 685 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 MAPK6Q16659 721 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 TRMT5Q32P41 509 aaKnown RBP13.23□□□□□ -0.29
CTCFL-218ENST00000608440 SYCP2LQ5T4T6 812 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 ITPRIPL1Q6GPH6 555 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 POTEHQ6S545 545 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 TMC7Q7Z402 723 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 CABP7Q86V35 215 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 SLC43A3Q8NBI5 491 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 CNBD2Q96M20 576 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 TUBB6Q9BUF5 446 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 ANKFY1Q9P2R3 1169 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 UVRAGQ9P2Y5 699 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 LY75O60449 1722 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 KRT15P19012 456 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 CDH3P22223 829 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 TCEA1P23193 301 aaKnown RBP13.23□□□□□ -0.29
CTCFL-218ENST00000608440 MARCKSL1P49006 195 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 NCKAP1LP55160 1127 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 RHBDL3P58872 404 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 IFNL3Q8IZI9 196 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 ICA1LQ8NDH6 482 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 ANKK1Q8NFD2 765 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 GSDMBQ8TAX9 411 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 PYROXD1Q8WU10 500 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 OSBPL8Q9BZF1 889 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 CRNKL1Q9BZJ0 848 aaKnown RBP13.23□□□□□ -0.29
CTCFL-218ENST00000608440 CEPT1Q9Y6K0 416 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 BCORQ6W2J9 1755 aa13.23□□□□□ -0.29
CTCFL-218ENST00000608440 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-218ENST00000608440 SLC5A3P53794 718 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 ZNF568Q3ZCX4 644 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 DCDC5Q6ZRR9 648 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 CENPSQ8N2Z9 138 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 RBM15Q96T37 977 aaKnown RBP eCLIP13.22□□□□□ -0.299e-11■□□□□ 8.6
CTCFL-218ENST00000608440 OSBPL6Q9BZF3 934 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 C12orf65Q9H3J6 166 aaKnown RBP13.22□□□□□ -0.29
CTCFL-218ENST00000608440 TBC1D23Q9NUY8 699 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■■■□□ 17.1
CTCFL-218ENST00000608440 ASIC3Q9UHC3 531 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 COL4A3BPQ9Y5P4 624 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 IGSF9BQ9UPX0 1349 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 IQCA1LA6NCM1 817 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 POC1B-GALNT4F8VUJ3 575 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 CIAO1O76071 339 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 LDHCP07864 332 aa13.22□□□□□ -0.29
CTCFL-218ENST00000608440 SLC9A1P19634 815 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms