RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 LRRC6Q86X45 466 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 AAASQ9NRG9 546 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■□□ 17.1
CTCFL-217ENST00000608425 HEY2Q9UBP5 337 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 APPL1Q9UKG1 709 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 NAALADL1Q9UQQ1 740 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 CYP26A1O43174 497 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 LDHCP07864 332 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 CHRNB2P17787 502 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 KCNA4P22459 653 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 BCAP31P51572 246 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 OGFOD2Q6N063 350 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 EPM2AIP1Q7L775 607 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-217ENST00000608425 CCDC84Q86UT8 332 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-217ENST00000608425 EXOC8Q8IYI6 725 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-217ENST00000608425 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 TMEM60Q9H2L4 133 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 MAD1L1Q9Y6D9 718 aa12.55□□□□□ -0.4
CTCFL-217ENST00000608425 V9GY48 417 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-217ENST00000608425 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 EP400Q96L91 3159 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 TSPY2A6NKD2 308 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 TMX2-CTNND1H3BSU7 103 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 CBFA2T3O75081 653 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 TSPY3P0CV98 308 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 TSPY8P0CW00 308 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 CETN2P41208 172 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 ASIC1P78348 528 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 TSPY1Q01534 308 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 ATP1A4Q13733 1029 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 HNRNPDQ14103 355 aaKnown RBP12.54□□□□□ -0.4
CTCFL-217ENST00000608425 CTTNQ14247 550 aaKnown RBP12.54□□□□□ -0.4
CTCFL-217ENST00000608425 TMIGD2Q96BF3 282 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 NSL1Q96IY1 281 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 COX4I2Q96KJ9 171 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 GCNAQ96QF7 691 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 C12orf65Q9H3J6 166 aaKnown RBP12.54□□□□□ -0.4
CTCFL-217ENST00000608425 NDUFA13Q9P0J0 144 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 ADAMTS6Q9UKP5 1117 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 BICDL2A1A5D9 508 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 K7EPI3 171 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 ATP2B4P23634 1241 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 PLCB3Q01970 1234 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 NPY5RQ15761 445 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
CTCFL-217ENST00000608425 ZBTB46Q86UZ6 589 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 POU5F2Q8N7G0 328 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 SACM1LQ9NTJ5 587 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 MTRF1LQ9UGC7 380 aaKnown RBP12.54□□□□□ -0.4
CTCFL-217ENST00000608425 NEU2Q9Y3R4 380 aa12.54□□□□□ -0.4
CTCFL-217ENST00000608425 ACTN1P12814 892 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 S100A1P23297 94 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 PON1P27169 355 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 PIK3CAP42336 1068 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 ASPHQ12797 758 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 LRRC41Q15345 812 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 SF3B4Q15427 424 aaKnown RBP eCLIP12.53□□□□□ -0.45e-10■□□□□ 9.4
CTCFL-217ENST00000608425 C12orf60Q5U649 245 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 UNC13DQ70J99 1090 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 GALNT4Q8N4A0 578 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 SERPINB12Q96P63 405 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 SERPINB2P05120 415 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 C6orf222P0C671 652 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-217ENST00000608425 OCM2P0CE71 109 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 OCMP0CE72 109 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-217ENST00000608425 IL1R1P14778 569 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 TMED2Q15363 201 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 TLR1Q15399 786 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 ZNF423Q2M1K9 1284 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 BPHLQ86WA6 291 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-217ENST00000608425 C4orf33Q8N1A6 199 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 PPM1KQ8N3J5 372 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 ALG3Q92685 438 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 HES6Q96HZ4 224 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 GPATCH1Q9BRR8 931 aaKnown RBP12.53□□□□□ -0.4
CTCFL-217ENST00000608425 ROPN1BQ9BZX4 212 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-217ENST00000608425 ROPN1Q9HAT0 212 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-217ENST00000608425 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
CTCFL-217ENST00000608425 SAR1AQ9NR31 198 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 AASDHPPTQ9NRN7 309 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 SLC38A7Q9NVC3 462 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 MCM9Q9NXL9 1143 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
CTCFL-217ENST00000608425 A0A1W2PRG0 241 aa12.52□□□□□ -0.4
CTCFL-217ENST00000608425 TCRBV7S2A1N4TA0A589 114 aa12.52□□□□□ -0.4
CTCFL-217ENST00000608425 KLRG2A4D1S0 409 aaPredicted RBP12.52□□□□□ -0.4
CTCFL-217ENST00000608425 BBOX1O75936 387 aa12.52□□□□□ -0.4
CTCFL-217ENST00000608425 SORBS2O94875 1100 aaKnown RBP12.52□□□□□ -0.4
CTCFL-217ENST00000608425 BMP15O95972 392 aa12.52□□□□□ -0.4
CTCFL-217ENST00000608425 ESRRAP11474 423 aaPredicted RBP12.52□□□□□ -0.4
CTCFL-217ENST00000608425 HSPA1LP34931 641 aa12.52□□□□□ -0.4
CTCFL-217ENST00000608425 SLC1A5Q15758 541 aa12.52□□□□□ -0.4
CTCFL-217ENST00000608425 ALKBH5Q6P6C2 394 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms