RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 PRCPP42785 496 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 PAFAH1B1P43034 410 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 WDR5P61964 334 aaKnown RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 KCNH2Q12809 1159 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 TMEM119Q4V9L6 283 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 KREMEN2Q8NCW0 462 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 SPPL2BQ8TCT7 592 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 TMC2Q8TDI7 906 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 SCFD1Q8WVM8 642 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 SECISBP2LQ93073 1101 aaKnown RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 SHDQ96IW2 340 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 MED15Q96RN5 788 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 CRISPLD2Q9H0B8 497 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 MRPL47Q9HD33 250 aaKnown RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ALG13Q9NP73 1137 aaKnown RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 INTS13Q9NVM9 706 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 TTLL3Q9Y4R7 772 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 SSC5DA1L4H1 1573 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 CTAGE9A4FU28 777 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 SYN3O14994 580 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 TSPAN1O60635 241 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ARL2P36404 184 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ARL4AP40617 200 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ATXN3P54252 364 aaPredicted RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 STARD3Q14849 445 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 AMHR2Q16671 573 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ZNF569Q5MCW4 686 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 EEF1DP3Q658K8 133 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 GET4Q7L5D6 327 aaPredicted RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 SH3RF1Q7Z6J0 888 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 DDX53Q86TM3 631 aaKnown RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 TDRD5Q8NAT2 981 aaKnown RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 HERVK_113Q902F9 699 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 HLA-CQ95604 372 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ZBTB45Q96K62 511 aaPredicted RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 PKNOX2Q96KN3 472 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ELOVL4Q9GZR5 314 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 NDST4Q9H3R1 872 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 FAM49BQ9NUQ9 324 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 RASAL2Q9UJF2 1139 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 C2CD2Q9Y426 696 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ERICH4A6NGS2 130 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 B4GALT5O43286 388 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 ATG7O95352 703 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 MOCS2O96007 188 aaPredicted RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 IRF1P10914 325 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 PTPN2P17706 415 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 ACO1P21399 889 aaKnown RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 MCM3P25205 808 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 COPB1P53618 953 aaKnown RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 ETF1P62495 437 aaKnown RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 PUS10Q3MIT2 529 aaKnown RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 MAP9Q49MG5 647 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 ACCSLQ4AC99 568 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 SLC39A12Q504Y0 691 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 JADE1Q6IE81 842 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 TMC5Q6UXY8 1006 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 PIK3R5Q8WYR1 880 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 RABGGTAQ92696 567 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 ZBTB10Q96DT7 871 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 PNMA5Q96PV4 448 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CDCA3Q99618 268 aaPredicted RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CBWD1Q9BRT8 395 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 GPR88Q9GZN0 384 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 TBC1D13Q9NVG8 400 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 THEGQ9P2T0 379 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 DNAJC12Q9UKB3 198 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 DERAQ9Y315 318 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 TUBGCP6Q96RT7 1819 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 TRAV19A0A0A6YYK7 116 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CTAGE15A4D2H0 777 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 PI4K2BG5E9Z4 385 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 P4HA2O15460 535 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 HMBSP08397 361 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CTAGE8P0CG41 777 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 HOXB8P17481 243 aaPredicted RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 GNA15P30679 374 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 GTF2H1P32780 548 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 SLC11A2P49281 568 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 ITKQ08881 620 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 ELF2Q15723 593 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CCDC122Q5T0U0 273 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CTAGE6Q86UF2 777 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 DDX42Q86XP3 938 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CBWD2Q8IUF1 395 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CTAGE4Q8IX94 777 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 OTUD6BQ8N6M0 293 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CEP112Q8N8E3 955 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 KLHL23Q8NBE8 558 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 KAT2BQ92831 832 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 HPS3Q969F9 1004 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 XPO6Q96QU8 1125 aaKnown RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 PLEKHA4Q9H4M7 779 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 TLR8Q9NR97 1041 aaKnown RBP5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 RGS18Q9NS28 235 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 CDY1Q9Y6F8 540 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 TIAM2Q8IVF5 1701 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 LAMB2P55268 1798 aa5.47□□□□□ -1.53
SCARNA15-201ENST00000607520 GOLGA6L10A0A0M3HER8 536 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms