RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 BCLAF3A2AJT9 711 aaKnown RBP16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 FAM205CA6NFA0 338 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 KHNYNO15037 678 aaKnown RBP16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 RNF40O75150 1001 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 SPATA31C1P0DKV0 1188 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CYP11B2P19099 503 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 GABRR2P28476 465 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 MCM2P49736 904 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 AMPD2Q01433 879 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CACNB1Q02641 598 aaPredicted RBP16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 NR5A1Q13285 461 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TMEM196Q5HYL7 178 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 USP37Q86T82 979 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ITIH5Q86UX2 942 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 BEST2Q8NFU1 509 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 C18orf25Q96B23 403 aaPredicted RBP16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 KIF12Q96FN5 646 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 DNAJC25Q9H1X3 360 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CDT1Q9H211 546 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 PCDHB8Q9UN66 801 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CYP46A1Q9Y6A2 500 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ZZEF1O43149 2961 aa16.81■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 DCLK1O15075 740 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 OR4Q2P0C623 313 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 KCNE1P15382 129 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 UAP1L1Q3KQV9 507 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 FSTL4Q6MZW2 842 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 GAREM2Q75VX8 874 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 EXOC4Q96A65 974 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 GCNAQ96QF7 691 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 MKNK1Q9BUB5 465 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CNTN3Q9P232 1028 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CEP295Q9C0D2 2601 aa16.8■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 STK36Q9NRP7 1315 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TRDMT1O14717 391 aaKnown RBP16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 MED24O75448 989 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 IRX6P78412 446 aaPredicted RBP16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 RUNX3Q13761 415 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 KIAA1211LQ6NV74 962 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 DNAJB7Q7Z6W7 309 aaPredicted RBP16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ERMNQ8TAM6 284 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 WASF1Q92558 559 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 KIFAP3Q92845 792 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 PSMG2Q969U7 264 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ACO2Q99798 780 aaKnown RBP16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 MRPL4Q9BYD3 311 aaKnown RBP16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 SLC32A1Q9H598 525 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TASP1Q9H6P5 420 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 POLD4Q9HCU8 107 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 GKN1Q9NS71 199 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 SLC27A5Q9Y2P5 690 aa16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TIMM13Q9Y5L4 95 aaPredicted RBP16.79■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CCDC169A6NNP5 214 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 PRAMEF12O95522 483 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 APBB3O95704 486 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 EGFP01133 1207 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 HARSP12081 509 aaKnown RBP16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 DRD1P21728 446 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CYP4F8P98187 520 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 GPR17Q13304 367 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TAF12Q16514 161 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 FBXO43Q4G163 708 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 C11orf74Q86VG3 221 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 DEFB124Q8NES8 71 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 POLR3CQ9BUI4 534 aaPredicted RBP16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CRISPLD1Q9H336 500 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 POLR3BQ9NW08 1133 aaPredicted RBP16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 NEUROG3Q9Y4Z2 214 aa16.78■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 PHLPP2Q6ZVD8 1323 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 OR6C75A6NL08 312 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 HYAL3O43820 417 aaPredicted RBP16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 OAZ2O95190 189 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 MCF2P10911 925 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 WEE1P30291 646 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CDC25CP30307 473 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 DGKEP52429 567 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 VEPH1Q14D04 833 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 USP39Q53GS9 565 aaKnown RBP16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CENPPQ6IPU0 288 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ARMCX5Q6P1M9 558 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CYP2U1Q7Z449 544 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 RPLP0P6Q8NHW5 317 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 COL26A1Q96A83 441 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ACDQ96AP0 544 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 MTMR9Q96QG7 549 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 EBF3Q9H4W6 596 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 EBF1Q9UH73 591 aa16.77■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 LAMA1P25391 3075 aa16.77■□□□□ 0.27
NEDD8-MDP1-204ENST00000605847 M0QZQ0 153 aa16.76■□□□□ 0.27
NEDD8-MDP1-204ENST00000605847 REC8O95072 547 aa16.76■□□□□ 0.27
NEDD8-MDP1-204ENST00000605847 VNN2O95498 520 aa16.76■□□□□ 0.27
NEDD8-MDP1-204ENST00000605847 RDXP35241 583 aaKnown RBP16.76■□□□□ 0.27
NEDD8-MDP1-204ENST00000605847 AVPR1AP37288 418 aa16.76■□□□□ 0.27
NEDD8-MDP1-204ENST00000605847 SCRN1Q12765 414 aa16.76■□□□□ 0.27
NEDD8-MDP1-204ENST00000605847 BFSP1Q12934 665 aa16.76■□□□□ 0.27
NEDD8-MDP1-204ENST00000605847 PSMD2Q13200 908 aa16.76■□□□□ 0.27
NEDD8-MDP1-204ENST00000605847 CC2D1AQ6P1N0 951 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms