RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 FBXO16Q8IX29 292 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SLCO2A1Q92959 643 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SEC16BQ96JE7 1060 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 RUNDC3BQ96NL0 473 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PRMT1Q99873 361 aaKnown RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 JPH2Q9BR39 696 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MRPL4Q9BYD3 311 aaKnown RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MLXIPLQ9NP71 852 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 NXF1Q9UBU9 619 aaKnown RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TJP2Q9UDY2 1190 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ANAPC5Q9UJX4 755 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CNTN6Q9UQ52 1028 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CSADQ9Y600 493 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CAPN7Q9Y6W3 813 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MCM3APO60318 1980 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 INO80B-WBP1J3KQ70 363 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 NOP56O00567 594 aaKnown RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ATP2C2O75185 946 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GAS8O95995 478 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PAEPP09466 180 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ATF2P15336 505 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ITIH2P19823 946 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ADCY1Q08828 1119 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 HP1BP3Q5SSJ5 553 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GPAT2Q6NUI2 795 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GPC2Q8N158 579 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 WDTC1Q8N5D0 677 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MGARPQ8TDB4 240 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 C9orf72Q96LT7 481 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 INO80BQ9C086 356 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ASCC2Q9H1I8 757 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PARVAQ9NVD7 372 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SOCS7O14512 581 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ITGBL1O95965 494 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ETS1P14921 441 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZNF132P52740 706 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PTK6Q13882 451 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MAPK6Q16659 721 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZNF568Q3ZCX4 644 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MFSD7Q6UXD7 560 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TRIM72Q6ZMU5 477 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GSTA5Q7RTV2 222 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 EXOC3L1Q86VI1 746 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ATXN2LQ8WWM7 1075 aaKnown RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CABS1Q96KC9 395 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GPR20Q99678 358 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MINDY3Q9H8M7 445 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CNOT10Q9H9A5 744 aaKnown RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TBK1Q9UHD2 729 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 POLIQ9UNA4 740 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 EVPLQ92817 2033 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PSTPIP1O43586 416 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DRD4P21917 467 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CLCN3P51790 818 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CDH8P55286 799 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 NFX1Q12986 1120 aaKnown RBP12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TRPC3Q13507 836 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DUOXA2Q1HG44 320 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TMEM132AQ24JP5 1023 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GJC2Q5T442 439 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DCUN1D2Q6PH85 259 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZPBP2Q6X784 338 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZNF365Q70YC5 407 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CHMP6Q96FZ7 201 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 FGD4Q96M96 766 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 FAM129AQ9BZQ8 928 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 INTS9Q9NV88 658 aaKnown RBP12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DNPEPQ9ULA0 475 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TMEM191CA6NGB0 347 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ABLIM1O14639 778 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 AGTP01019 485 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 KRT19P08727 400 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 IQCF3P0C7M6 154 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TMEM191BP0C7N4 346 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 IGBP1P78318 339 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 WDR49Q8IV35 697 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 KATNAL2Q8IYT4 538 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 VCPIP1Q96JH7 1222 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SPATA33Q96N06 139 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZNF317Q96PQ6 595 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SGIP1Q9BQI5 828 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 OSBPL7Q9BZF2 842 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SAE1Q9UBE0 346 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 NEU2Q9Y3R4 380 aa12.5□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GOLGA8SH3BPF8 625 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 OGTO15294 1046 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CNMDO75829 334 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TTC4O95801 387 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 HOXC6P09630 235 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 EFNA5P52803 228 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CCNG2Q16589 344 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 FAM182AQ5T1J6 154 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms