RNA–Protein interactions for RNA: ENST00000602970.1

UBE2E3-214, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-214ENST00000602970 ZNF571Q7Z3V5 609 aaPredicted RBP12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 ZNF598Q86UK7 904 aaKnown RBP12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 LRRC52Q8N7C0 313 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 UBR7Q8N806 425 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 APBB2Q92870 758 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 SCLYQ96I15 445 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 FAXDC2Q96IV6 333 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 ZNF560Q96MR9 790 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 PPP1R10Q96QC0 940 aaKnown RBP12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 GAD1Q99259 594 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 UBN1Q9NPG3 1134 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 RNF19AQ9NV58 838 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 SLC38A7Q9NVC3 462 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 POLIQ9UNA4 740 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 REXO2Q9Y3B8 237 aaKnown RBP12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 PCDHB4Q9Y5E5 795 aa12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.9□□□□□ -0.34
UBE2E3-214ENST00000602970 GOLGA6L9A6NEM1 432 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 ARL5CA6NH57 179 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 PPEF2O14830 753 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 CYP26A1O43174 497 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 LCA5LO95447 670 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 CYP2C18P33260 490 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 PDE6CP51160 858 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 SCNN1GP51170 649 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 CCL23P55773 120 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 TNNC1P63316 161 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 SOX4Q06945 474 aaPredicted RBP12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 MYO1EQ12965 1108 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 SLC18A3Q16572 532 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 WDR72Q3MJ13 1102 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 SLC24A5Q71RS6 500 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 RTN4RL1Q86UN2 441 aaPredicted RBP12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 RBBP8NLQ8NC74 664 aaPredicted RBP12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 DBF4BQ8NFT6 615 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 EPS8L1Q8TE68 723 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 SYT11Q9BT88 431 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 BCO2Q9BYV7 579 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 GOLGA2P5Q9HBQ8 144 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 TMEM39AQ9NV64 488 aa12.89□□□□□ -0.35
UBE2E3-214ENST00000602970 TSC2P49815 1807 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 A0A087X0T9 212 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 ANO9A1A5B4 782 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 ZNF263O14978 683 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 CXCL10P02778 98 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 THP07101 528 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 FAM228BP0C875 321 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 CD58P19256 250 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 LRPAP1P30533 357 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 CLCN1P35523 988 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 PNPLA4P41247 253 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 RAP1GAPP47736 663 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 BPIFB4P59827 614 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 CYP27A1Q02318 531 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 GFPT1Q06210 699 aaPredicted RBP12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 GRIK3Q13003 919 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 BMS1Q14692 1282 aaKnown RBP12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 TMEM270Q6UE05 265 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 KIAA1328Q86T90 577 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 NOP9Q86U38 636 aaKnown RBP12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 REXO1L1PQ8IX06 675 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 GSTCDQ8NEC7 633 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 OLIG1Q8TAK6 271 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 LNX1Q8TBB1 728 aaPredicted RBP12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 SLC20A1Q8WUM9 679 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 AGPAT1Q99943 283 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 CISHQ9NSE2 258 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 NOCTQ9UK39 431 aaKnown RBP12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 TTC3P53804 2025 aa12.88□□□□□ -0.35
UBE2E3-214ENST00000602970 DDX3XO00571 662 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 PIRO00625 290 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 INPPL1O15357 1258 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 EOMESO95936 686 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 WEE2P0C1S8 567 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 CYP11B1P15538 503 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 TNFAIP3P21580 790 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 RFC2P35250 354 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 TAF6P49848 677 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 AFF1P51825 1210 aaKnown RBP12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 VAV2P52735 878 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 ZNF132P52740 706 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 FAM189BP81408 668 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 NAB2Q15742 525 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 SV2CQ496J9 727 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 GLB1LQ6UWU2 654 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 SLC47A2Q86VL8 602 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 GLYCTKQ8IVS8 523 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 TXLNBQ8N3L3 684 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 SDCBP2Q9H190 292 aa12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 RRAGDQ9NQL2 400 aaPredicted RBP12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 SEPT11Q9NVA2 429 aaKnown RBP12.87□□□□□ -0.35
UBE2E3-214ENST00000602970 TMEM161AQ9NX61 479 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms