RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 SGO1Q5FBB7 561 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 PSD3Q9NYI0 1048 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 SERPIND1P05546 499 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 C4BPBP20851 252 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 E4F1Q66K89 784 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-217ENST00000602723 DDHD1Q8NEL9 900 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 SH3GL1Q99961 368 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 CYP2E1P05181 493 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-217ENST00000602723 USP11P51784 963 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 MEI1Q5TIA1 1274 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 BBS7Q8IWZ6 715 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 ZNF786Q8N393 782 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 FAM129AQ9BZQ8 928 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 DYRK4Q9NR20 520 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 ZBTB39O15060 712 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 RASSF9O75901 435 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 MKRN4PQ13434 485 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-217ENST00000602723 TMEM132DQ14C87 1099 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 C9orf72Q96LT7 481 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 CHP1Q99653 195 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 ZBED2Q9BTP6 218 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 FBXO2Q9UK22 296 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-217ENST00000602723 PCDHB8Q9UN66 801 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 SAMD9LQ8IVG5 1584 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 FOXN1O15353 648 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 SASH1O94885 1247 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 TRIM25Q14258 630 aaKnown RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 USP10Q14694 798 aaKnown RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 BARGINQ6ZT62 677 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 JAMLQ86YT9 394 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 NOD2Q9HC29 1040 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 SOX13Q9UN79 622 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 CHD1O14646 1710 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 RGS5O15539 181 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 SNRPAP09012 282 aaKnown RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 EFNA5P52803 228 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 CACNB3P54284 484 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 APPL2Q8NEU8 664 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 FLCNQ8NFG4 579 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 SNRNP27Q8WVK2 155 aaKnown RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 NDEL1Q9GZM8 345 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 TMEM117Q9H0C3 514 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 PSMD3O43242 534 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 RAD51CO43502 376 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 STRNO43815 780 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 KCNK10P57789 538 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 SWSAP1Q6NVH7 229 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 POLE3Q9NRF9 147 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 TRPC5OSA6NMA1 111 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 GRAPQ13588 217 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 CCNI2Q6ZMN8 369 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 FGD2Q7Z6J4 655 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 C11orf74Q86VG3 221 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 GRAPLQ8TC17 118 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 TRIM9Q9C026 710 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 ZBTB22O15209 634 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 USP1O94782 785 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 HIST1H2AGP0C0S8 130 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 HIST1H2ADP20671 130 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 SPRP35270 261 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 CCZ1BP86790 482 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 CCZ1P86791 482 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 GTF2H3Q13889 308 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 PDK1Q15118 436 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 PTGISQ16647 500 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 HIST1H2AHQ96KK5 128 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 TNIP3Q96KP6 325 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 GPR101Q96P66 508 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 HIST1H2AJQ99878 128 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 H2AFJQ9BTM1 129 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 PDXKO00764 312 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 NUDT2P50583 147 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 RIBC1Q8N443 379 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 CALML6Q8TD86 181 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 IL1RAPL1Q9NZN1 696 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 LRRC7Q96NW7 1537 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 GRIK1P39086 918 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 CACNB2Q08289 660 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 NCOA4Q13772 614 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 LMBRD2Q68DH5 695 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 SLC44A5Q8NCS7 719 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 ANKRD7Q92527 254 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 POLBP06746 335 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 MAGEA4P43358 317 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 TRIM71Q2Q1W2 868 aaKnown RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 SHCBP1Q8NEM2 672 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 ROPN1BQ9BZX4 212 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 KLHL25Q9H0H3 589 aa10.03□□□□□ -0.8
CSMD1-217ENST00000602723 ROPN1Q9HAT0 212 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-217ENST00000602723 KIF28PB7ZC32 967 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 ATMINO43313 823 aaPredicted RBP10.02□□□□□ -0.8
CSMD1-217ENST00000602723 YWHABP31946 246 aaKnown RBP10.02□□□□□ -0.8
CSMD1-217ENST00000602723 IRAK1P51617 712 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 RCSD1Q6JBY9 416 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 TRIM10Q9UDY6 481 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 ADGRL3Q9HAR2 1447 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.8
CSMD1-217ENST00000602723 AKR1B1P15121 316 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 NCALDP61601 193 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 NAB2Q15742 525 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms