RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 AP3B2Q13367 1082 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 TMEM47Q9BQJ4 181 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 IP6K2Q9UHH9 426 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 MOSPD1Q9UJG1 213 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 LRRC7Q96NW7 1537 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 BTN3A3O00478 584 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 APOL1O14791 398 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 SASH3O75995 380 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 FCER1AP12319 257 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 LAYNQ6UX15 382 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 RAD9BQ6WBX8 426 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 TRIM63Q969Q1 353 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 MXD3Q9BW11 206 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 MAGEB5Q9BZ81 275 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 MYH3P11055 1940 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 FAM196BA6NMK8 535 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 TBKBP1A7MCY6 615 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 CDH6P55285 790 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 STK4Q13043 487 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 MTM1Q13496 603 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 COG2Q14746 738 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 FAM129AQ9BZQ8 928 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 KLHL17Q6TDP4 642 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 PIGBQ92521 554 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 ZNF668Q96K58 619 aaPredicted RBP9.1□□□□□ -0.95
CSMD1-216ENST00000602557 C9orf72Q96LT7 481 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 PCDHA6Q9UN73 950 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 PCDHA8Q9Y5H6 950 aa9.1□□□□□ -0.95
CSMD1-216ENST00000602557 ERVV-1B6SEH8 477 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ALOX12P18054 663 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 SYTL1Q8IYJ3 562 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 EHD4Q9H223 541 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 DHX35Q9H5Z1 703 aaKnown RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 RERGLQ9H628 205 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 PRKAG2Q9UGJ0 569 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ARID1BQ8NFD5 2236 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 CDC27P30260 824 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 BCAR1P56945 870 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ITGADQ13349 1161 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 TFDP2Q14188 446 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 CEP95Q96GE4 821 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ITM2BQ9Y287 266 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 EMSYQ7Z589 1322 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 HUS1O60921 280 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 KCNB2Q92953 911 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ATXN10Q9UBB4 475 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ITGB1BP2Q9UKP3 347 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 NPHP3-ACAD11A0A0J9YXS1 232 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 CYP2E1P05181 493 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 HSPA13P48723 471 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 TMEM63BQ5T3F8 832 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 GLYCTKQ8IVS8 523 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 TERB1Q8NA31 727 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 SPRTNQ9H040 489 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ZNF212Q9UDV6 495 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ABT1Q9ULW3 272 aaKnown RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 RWDD3Q9Y3V2 267 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 OPLAHO14841 1288 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 SRP72O76094 671 aaKnown RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 S100A9P06702 114 aaKnown RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 IFNA8P32881 189 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 NUDT2P50583 147 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ELF3P78545 371 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 KCNMA1Q12791 1236 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 CLVS1Q8IUQ0 354 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 THEM5Q8N1Q8 247 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 FAM167AQ96KS9 214 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 LOC100653049A0A140TA62 436 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 IDH3BO43837 385 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 KRT34O76011 436 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 CASP5P51878 434 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 NR1D2Q14995 579 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 PERM1Q5SV97 790 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ZNF302Q9NR11 478 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 SEL1LQ9UBV2 794 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 E7ENQ6 273 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 CHI3L2Q15782 390 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ARMCX4Q5H9R4 360 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 ITPRIPL1Q6GPH6 555 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 LRRC74BQ6ZQY2 392 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 KCTD17Q8N5Z5 321 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 QKIQ96PU8 341 aaKnown RBP eCLIP9.09□□□□□ -0.957e-33■■■■■ 356
CSMD1-216ENST00000602557 EPAS1Q99814 870 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 FAM118BQ9BPY3 351 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 NDUFA13Q9P0J0 144 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 LRCH1Q9Y2L9 728 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 PSTPIP1O43586 416 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 LCP1P13796 627 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 GALK1P51570 392 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 TNFAIP2Q03169 654 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 EPHA10Q5JZY3 1008 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 KDELC2Q7Z4H8 507 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 MTDHQ86UE4 582 aaKnown RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 FAM162AQ96A26 154 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 C17orf80Q9BSJ5 609 aa9.09□□□□□ -0.95
CSMD1-216ENST00000602557 TOPORSQ9NS56 1045 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-216ENST00000602557 PARNO95453 639 aaKnown RBP9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms