RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SUMF1Q8NBK3 374 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 PATJQ8NI35 1801 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 SENP8Q96LD8 212 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 FIZ1Q96SL8 496 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 DNAJC25Q9H1X3 360 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 ZNF334Q9HCZ1 680 aaPredicted RBP14.28□□□□□ -0.12
RPS28-204ENST00000602140 SLC27A5Q9Y2P5 690 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 FANCMQ8IYD8 2048 aa14.27□□□□□ -0.12
RPS28-204ENST00000602140 NCANO14594 1321 aa14.27□□□□□ -0.12
RPS28-204ENST00000602140 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 MTMR11A4FU01 709 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 ANKRD63C9JTQ0 380 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 MAN2B1O00754 1011 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 ZNF263O14978 683 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 SPTLC1O15269 473 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 CENPBP07199 599 aaPredicted RBP14.27□□□□□ -0.13
RPS28-204ENST00000602140 NFICP08651 508 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 ODC1P11926 461 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 ALDH1A3P47895 512 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 ACOT2P49753 483 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 GTF2BQ00403 316 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 MYBPC2Q14324 1141 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 ZC2HC1CQ53FD0 456 aaPredicted RBP14.27□□□□□ -0.13
RPS28-204ENST00000602140 C9orf57Q5W0N0 161 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 CENPPQ6IPU0 288 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 TSSK4Q6SA08 328 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 ERMP1Q7Z2K6 904 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 TMC8Q8IU68 726 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 MFSD6LQ8IWD5 586 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 ATAD1Q8NBU5 361 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 DEPDC1BQ8WUY9 529 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 ATRIPQ8WXE1 791 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 LARP4BQ92615 738 aaKnown RBP14.27□□□□□ -0.13
RPS28-204ENST00000602140 BORCS6Q96GS4 357 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 TMEM209Q96SK2 561 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 LRRC3Q9BY71 257 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 GPR88Q9GZN0 384 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 TRPV4Q9HBA0 871 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 TRPV5Q9NQA5 729 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 PCDHGA2Q9Y5H1 932 aa14.27□□□□□ -0.13
RPS28-204ENST00000602140 HEPACAM2A8MVW5 462 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 TISP43B9A030 160 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 SOAT2O75908 522 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 PAX3P23760 479 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 ABCD1P33897 745 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 DDIT3P35638 169 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 MTAPQ13126 283 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 TMEM132DQ14C87 1099 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 ADALQ6DHV7 355 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 ZNF687Q8N1G0 1237 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 TTC9BQ8N6N2 239 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 KRI1Q8N9T8 703 aaKnown RBP14.26□□□□□ -0.13
RPS28-204ENST00000602140 ZBTB44Q8NCP5 570 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 FAM3CQ92520 227 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 RMDN1Q96DB5 314 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 CCSER1Q9C0I3 900 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 ZSCAN32Q9NX65 697 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 PIAS3Q9Y6X2 628 aa14.26□□□□□ -0.13
RPS28-204ENST00000602140 ANO9A1A5B4 782 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 VPS37CA5D8V6 355 aaPredicted RBP14.25□□□□□ -0.13
RPS28-204ENST00000602140 PIRO00625 290 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 STXBP5Q5T5C0 1151 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 USP49Q70CQ1 688 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 DYMQ7RTS9 669 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 DNAJB7Q7Z6W7 309 aaPredicted RBP14.25□□□□□ -0.13
RPS28-204ENST00000602140 GPIHBP1Q8IV16 184 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 YAF2Q8IY57 180 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 OR10T2Q8NGX3 314 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 NELL1Q92832 810 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 PSMG2Q969U7 264 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 E2F7Q96AV8 911 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 RSPRY1Q96DX4 576 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 EPSTI1Q96J88 318 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 IKZF4Q9H2S9 585 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 CHRDQ9H2X0 955 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 ASB7Q9H672 318 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 LMAN1LQ9HAT1 526 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 PRMT8Q9NR22 394 aaPredicted RBP14.25□□□□□ -0.13
RPS28-204ENST00000602140 AGO2Q9UKV8 859 aaKnown RBP14.25□□□□□ -0.13
RPS28-204ENST00000602140 DERAQ9Y315 318 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 ASB3Q9Y575 518 aa14.25□□□□□ -0.13
RPS28-204ENST00000602140 COL4A2P08572 1712 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 TICRRQ7Z2Z1 1910 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 ARNTLO00327 626 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 CYP11A1P05108 521 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 CCNE1P24864 410 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 CDR1P51861 262 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 SLFN12LQ6IEE8 588 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 GAREM2Q75VX8 874 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 ZNF720Q7Z2F6 126 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 SFR1Q86XK3 245 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 ARID3BQ8IVW6 561 aaPredicted RBP14.24□□□□□ -0.13
RPS28-204ENST00000602140 CSGALNACT1Q8TDX6 532 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 ATXN3LQ9H3M9 355 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 ST6GALNAC4Q9H4F1 302 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 DPP3Q9NY33 737 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 NCDNQ9UBB6 729 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 C2CD2Q9Y426 696 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms