RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MYCT1Q8N699 235 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 ZSCAN18Q8TBC5 510 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 ASB7Q9H672 318 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 OBP2AQ9NY56 170 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 YIPF1Q9Y548 306 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 CITO14578 2027 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 A0A0B4J269 797 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 LACTBL1A8MY62 500 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 CHADO15335 359 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 TRAK2O60296 914 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 MOSPD3O75425 235 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 FAM13AO94988 1023 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 ODC1P11926 461 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 WEE1P30291 646 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 LONP1P36776 959 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 SEZ6Q53EL9 994 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 CENPPQ6IPU0 288 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 VITQ6UXI7 678 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 HS6ST3Q8IZP7 471 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 ZNF687Q8N1G0 1237 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 CELF5Q8N6W0 485 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 CSGALNACT1Q8TDX6 532 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 SLITRK6Q9H5Y7 841 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 SMG5Q9UPR3 1016 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 PIAS3Q9Y6X2 628 aa19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 TPRP12270 2363 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-227ENST00000602011 CACNA1BQ00975 2339 aa19.33■□□□□ 0.69
SHKBP1-227ENST00000602011 HEPACAM2A8MVW5 462 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 LILRA4P59901 499 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 GTF2BQ00403 316 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 FCHO2Q0JRZ9 810 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 DUSP4Q13115 394 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 MTAPQ13126 283 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 LRRC32Q14392 662 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 GRM2Q14416 872 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 ENOX2Q16206 610 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 C2orf15Q8WU43 125 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 TMX3Q96JJ7 454 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 ZSWIM3Q96MP5 696 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 CNTNAP3BQ96NU0 1288 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 PLIN2Q99541 437 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 MSTO1Q9BUK6 570 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 CNTNAP3Q9BZ76 1288 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 HAPLN2Q9GZV7 340 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 ST6GALNAC4Q9H4F1 302 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 LMAN1LQ9HAT1 526 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 RAB23Q9ULC3 237 aa19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 NDRG2Q9UN36 371 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-227ENST00000602011 CYP11A1P05108 521 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 KRT18P05783 430 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 GJB2P29033 226 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 CNR2P34972 360 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 LMNB2Q03252 620 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 TEAD2Q15562 447 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 ARHGAP15Q53QZ3 475 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 BRAPQ7Z569 592 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 DNAJB7Q7Z6W7 309 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 GPBP1Q86WP2 473 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 SHKBP1Q8TBC3 707 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 PSMG2Q969U7 264 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 REEP2Q9BRK0 252 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 LRRC3Q9BY71 257 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 UPF2Q9HAU5 1272 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 CPSF3Q9UKF6 684 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 C2CD2Q9Y426 696 aa19.32■□□□□ 0.68
SHKBP1-227ENST00000602011 EPG5Q9HCE0 2579 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 K7ENM7 598 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 DPYSL4O14531 572 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 FAM189A1O60320 539 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 TBCAO75347 108 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 KRT37O76014 449 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 VIPR2P41587 438 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 CXCL12P48061 93 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 ATXN1P54253 815 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 PLCB2Q00722 1185 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 POSTNQ15063 836 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 PTPAQ15257 358 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 LPAL2Q16609 132 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 ARHGAP29Q52LW3 1261 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 DGKKQ5KSL6 1271 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 RALGPS2Q86X27 583 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 METTL23Q86XA0 190 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 NT5DC4Q86YG4 428 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 THEM5Q8N1Q8 247 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 SYNPOQ8N3V7 929 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 SPEM1Q8N4L4 309 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 SENP8Q96LD8 212 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 GMEB2Q9UKD1 530 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 SMC3Q9UQE7 1217 aa19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 TIMM13Q9Y5L4 95 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-227ENST00000602011 NPHP3-ACAD11A0A0J9YXS1 232 aa19.3■□□□□ 0.68
SHKBP1-227ENST00000602011 SOBPA7XYQ1 873 aa19.3■□□□□ 0.68
SHKBP1-227ENST00000602011 ARNTLO00327 626 aa19.3■□□□□ 0.68
SHKBP1-227ENST00000602011 PIRO00625 290 aa19.3■□□□□ 0.68
SHKBP1-227ENST00000602011 LRP3O75074 770 aa19.3■□□□□ 0.68
SHKBP1-227ENST00000602011 CHRNB1P11230 501 aa19.3■□□□□ 0.68
SHKBP1-227ENST00000602011 DDIT3P35638 169 aa19.3■□□□□ 0.68
SHKBP1-227ENST00000602011 TNFSF9P41273 254 aa19.3■□□□□ 0.68
SHKBP1-227ENST00000602011 SPAG1Q07617 926 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms