RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 PDIA5Q14554 519 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 NOLC1Q14978 699 aaKnown RBP eCLIP18.27■□□□□ 0.52
USE1-208ENST00000600970 SF3A2Q15428 464 aaKnown RBP18.27■□□□□ 0.52
USE1-208ENST00000600970 AASDHQ4L235 1098 aaPredicted RBP18.27■□□□□ 0.52
USE1-208ENST00000600970 ARHGAP29Q52LW3 1261 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 GAREM2Q75VX8 874 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 ARRDC1-AS1Q9H2J1 176 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 FOXP1Q9H334 677 aaPredicted RBP18.27■□□□□ 0.52
USE1-208ENST00000600970 C17orf75Q9HAS0 396 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 ANKFY1Q9P2R3 1169 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 ANGPTL2Q9UKU9 493 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 DNM3Q9UQ16 869 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 MYH11P35749 1972 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 CFAP47Q6ZTR5 3102 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 OR6C75A6NL08 312 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 SFI1A8K8P3 1242 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 DPYSL4O14531 572 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 TOM1L1O75674 476 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 CXCL8P10145 99 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 PMLP29590 882 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 AARSP49588 968 aaKnown RBP eCLIP18.26■□□□□ 0.51
USE1-208ENST00000600970 NBR1Q14596 966 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 CCDC6Q16204 474 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 GPR158Q5T848 1215 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 N4BP2L1Q5TBK1 243 aaPredicted RBP18.26■□□□□ 0.51
USE1-208ENST00000600970 CENPPQ6IPU0 288 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 RINT1Q6NUQ1 792 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 C1orf186Q6ZWK4 172 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 HAUS6Q7Z4H7 955 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 DNAJB7Q7Z6W7 309 aaPredicted RBP18.26■□□□□ 0.51
USE1-208ENST00000600970 SYNPOQ8N3V7 929 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 IGSF22Q8N9C0 903 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 NTPCRQ9BSD7 190 aaKnown RBP18.26■□□□□ 0.51
USE1-208ENST00000600970 ATXN3LQ9H3M9 355 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 RXFP3Q9NSD7 469 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 OBP2AQ9NY56 170 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 SLC27A5Q9Y2P5 690 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 ASB3Q9Y575 518 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 STK24Q9Y6E0 443 aa18.26■□□□□ 0.51
USE1-208ENST00000600970 MAP1BP46821 2468 aaKnown RBP18.26■□□□□ 0.51
USE1-208ENST00000600970 EML5Q05BV3 1969 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 MTMR11A4FU01 709 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 EXTL3O43909 919 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 GABRR2P28476 465 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 TNK2Q07912 1038 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 STRN3Q13033 797 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 ZBTB6Q15916 424 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 USP37Q86T82 979 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 TTC9BQ8N6N2 239 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 C12orf50Q8NA57 414 aaPredicted RBP18.25■□□□□ 0.51
USE1-208ENST00000600970 ATAD1Q8NBU5 361 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 GAB3Q8WWW8 586 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 PSMG2Q969U7 264 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 LOXL4Q96JB6 756 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 C8orf76Q96K31 380 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 HAPLN2Q9GZV7 340 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 PLEKHA5Q9HAU0 1116 aa18.25■□□□□ 0.51
USE1-208ENST00000600970 ANK1P16157 1881 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 TTC26A0AVF1 554 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 PP2D1A8MPX8 630 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 CLDN3O15551 220 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 SOAT2O75908 522 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 PRAMEF12O95522 483 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 ZNF806P0C7X5 589 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 CACNB1Q02641 598 aaPredicted RBP18.24■□□□□ 0.51
USE1-208ENST00000600970 MCL1Q07820 350 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 MYBPC2Q14324 1141 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 PKN3Q6P5Z2 889 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 DSTYKQ6XUX3 929 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 KCNK18Q7Z418 384 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 TMEM161BQ8NDZ6 487 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 BPIFB1Q8TDL5 484 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 KIF12Q96FN5 646 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 TMEM209Q96SK2 561 aa18.24■□□□□ 0.51
USE1-208ENST00000600970 TSC2P49815 1807 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 EPN2O95208 641 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 FGF19O95750 216 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 CYP3A5P20815 502 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 WEE1P30291 646 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 RAP1GAPP47736 663 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 TRAPPC10P48553 1259 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 PXNP49023 591 aaPredicted RBP18.23■□□□□ 0.51
USE1-208ENST00000600970 NEK4P51957 841 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 SHC2P98077 582 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 PLCB2Q00722 1185 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 ARHGAP15Q53QZ3 475 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 OVOS1Q6IE37 1185 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 ZPBP2Q6X784 338 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 CACNA2D4Q7Z3S7 1137 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 KBTBD6Q86V97 674 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 SPIRE2Q8WWL2 714 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 TIPINQ9BVW5 301 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 RAB34Q9BZG1 259 aa18.23■□□□□ 0.51
USE1-208ENST00000600970 UBQLN1Q9UMX0 589 aaKnown RBP18.23■□□□□ 0.51
USE1-208ENST00000600970 CCDC163A0A0D9SF12 145 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 RPP40O75818 363 aaKnown RBP18.22■□□□□ 0.51
USE1-208ENST00000600970 CLTAP09496 248 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 MAPTP10636 758 aaKnown RBP18.22■□□□□ 0.51
USE1-208ENST00000600970 TYMPP19971 482 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 GUCY2CP25092 1073 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms