RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 DMAC2Q9NW81 257 aa17.48■□□□□ 0.39
LSM4-206ENST00000600289 RMND1Q9NWS8 449 aa17.48■□□□□ 0.39
LSM4-206ENST00000600289 HOOK1Q9UJC3 728 aaKnown RBP17.48■□□□□ 0.39
LSM4-206ENST00000600289 ITGA11Q9UKX5 1188 aa17.48■□□□□ 0.39
LSM4-206ENST00000600289 TRAF3IP3Q9Y228 551 aa17.48■□□□□ 0.39
LSM4-206ENST00000600289 CDY1Q9Y6F8 540 aa17.48■□□□□ 0.39
LSM4-206ENST00000600289 NCOR2Q9Y618 2525 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 FRYLO94915 3013 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 CLIC2O15247 247 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 ADAM12O43184 909 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 CYP11A1P05108 521 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 POU2F2P09086 479 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 HOXA9P31269 272 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 OR1D2P34982 312 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 TAF6P49848 677 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 PSMD6Q15008 389 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 COBLL1Q53SF7 1204 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 WDR49Q8IV35 697 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 LRRC52Q8N7C0 313 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 C12orf76Q8N812 135 aaPredicted RBP17.47■□□□□ 0.39
LSM4-206ENST00000600289 C1orf127Q8N9H9 656 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 KREMEN2Q8NCW0 462 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 GSDMAQ96QA5 445 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 GTPBP4Q9BZE4 634 aaKnown RBP17.47■□□□□ 0.39
LSM4-206ENST00000600289 PDE11AQ9HCR9 933 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 INTS13Q9NVM9 706 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 MAFFQ9ULX9 164 aa17.47■□□□□ 0.39
LSM4-206ENST00000600289 CFAP47Q6ZTR5 3102 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 SPTLC1O15269 473 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 PRPF40AO75400 957 aaKnown RBP17.46■□□□□ 0.39
LSM4-206ENST00000600289 ZMYND10O75800 440 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 ABLIM3O94929 683 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 ODC1P11926 461 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 CYP2J2P51589 502 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 TFAMQ00059 246 aaKnown RBP17.46■□□□□ 0.39
LSM4-206ENST00000600289 ROR1Q01973 937 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 YWHAHQ04917 246 aaPredicted RBP17.46■□□□□ 0.39
LSM4-206ENST00000600289 CYP24A1Q07973 514 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 PNOCQ13519 176 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 SV2CQ496J9 727 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 ATAT1Q5SQI0 421 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 DSTYKQ6XUX3 929 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 CLEC17AQ6ZS10 378 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 GLYCTKQ8IVS8 523 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 BORCS6Q96GS4 357 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 FBXL5Q9UKA1 691 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 DSEQ9UL01 958 aa17.46■□□□□ 0.39
LSM4-206ENST00000600289 PTPRJQ12913 1337 aa17.46■□□□□ 0.38
LSM4-206ENST00000600289 GALR2O43603 387 aaPredicted RBP17.45■□□□□ 0.38
LSM4-206ENST00000600289 GADD45BO75293 160 aaPredicted RBP17.45■□□□□ 0.38
LSM4-206ENST00000600289 SMC2O95347 1197 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 ITGB3P05106 788 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 HNRNPA1P09651 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
LSM4-206ENST00000600289 TMEM191BP0C7N4 346 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 UVSSAQ2YD98 709 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 TPGS2Q68CL5 300 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 TMC5Q6UXY8 1006 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 ZNF461Q8TAF7 563 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 NOC3LQ8WTT2 800 aaKnown RBP17.45■□□□□ 0.38
LSM4-206ENST00000600289 ZNF707Q96C28 371 aaPredicted RBP17.45■□□□□ 0.38
LSM4-206ENST00000600289 ANKRD36BP1Q96IX9 119 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 SENP8Q96LD8 212 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 CGRRF1Q99675 332 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 APOL5Q9BWW9 433 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 POMKQ9H5K3 350 aa17.45■□□□□ 0.38
LSM4-206ENST00000600289 NOTCH4Q99466 2003 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 CCDC195A0A1B0GUA6 201 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 WDR27A2RRH5 827 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 OR6C75A6NL08 312 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 SPDYE4A6NLX3 237 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 KPNA7A9QM74 516 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 MAPK13O15264 365 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 CALUO43852 315 aaPredicted RBP17.44■□□□□ 0.38
LSM4-206ENST00000600289 EXOC3O60645 756 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 KINO60870 393 aaKnown RBP17.44■□□□□ 0.38
LSM4-206ENST00000600289 PDGFBP01127 241 aaPredicted RBP17.44■□□□□ 0.38
LSM4-206ENST00000600289 NR3C1P04150 777 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 POLR2BP30876 1174 aaKnown RBP17.44■□□□□ 0.38
LSM4-206ENST00000600289 NUBP1P53384 320 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 UBE2HP62256 183 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 CLDN10P78369 228 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 DUOXA2Q1HG44 320 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 CTXN3Q4LDR2 81 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 LIN9Q5TKA1 542 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 ZNF658Q5TYW1 1059 aaPredicted RBP17.44■□□□□ 0.38
LSM4-206ENST00000600289 OR5B17Q8NGF7 314 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 PRKD2Q9BZL6 878 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 MTMR12Q9C0I1 747 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 GZF1Q9H116 711 aaPredicted RBP17.44■□□□□ 0.38
LSM4-206ENST00000600289 SIX4Q9UIU6 781 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 USTQ9Y2C2 406 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 CACNA1GO43497 2377 aa17.44■□□□□ 0.38
LSM4-206ENST00000600289 BAHCC1Q9P281 2608 aa17.43■□□□□ 0.38
LSM4-206ENST00000600289 DOCK8Q8NF50 2099 aa17.43■□□□□ 0.38
LSM4-206ENST00000600289 RFPL2O75678 378 aa17.43■□□□□ 0.38
LSM4-206ENST00000600289 TNNC2P02585 160 aa17.43■□□□□ 0.38
LSM4-206ENST00000600289 C8AP07357 584 aa17.43■□□□□ 0.38
LSM4-206ENST00000600289 SPATA31D3P0C874 917 aa17.43■□□□□ 0.38
LSM4-206ENST00000600289 ATF2P15336 505 aa17.43■□□□□ 0.38
LSM4-206ENST00000600289 RBP5P82980 135 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms