RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 KIAA1217Q5T5P2 1943 aa12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 A0A087WZ62 844 aa12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 STAM2O75886 525 aa12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 HSPA6P17066 643 aa12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 ZKSCAN8Q15776 578 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 C9orf131Q5VYM1 1079 aa12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 RHOT1Q8IXI2 618 aa12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 MYCBPAPQ8TBZ2 947 aa12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 CABS1Q96KC9 395 aa12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 FDXACB1Q9BRP7 624 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 CDC42EP4Q9H3Q1 356 aaKnown RBP12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 CD248Q9HCU0 757 aa12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 MRPL47Q9HD33 250 aaKnown RBP12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 ADARB2Q9NS39 739 aaKnown RBP12.23□□□□□ -0.45
ARHGEF1-220ENST00000600274 ZNF646O15015 1829 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 PROSCO94903 275 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 ITGB3P05106 788 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 CHN1P15882 459 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 ACO1P21399 889 aaKnown RBP12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 ANKS1BQ7Z6G8 1248 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 KIRREL3Q8IZU9 778 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 UBA3Q8TBC4 463 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 TFAP2BQ92481 460 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 CD101Q93033 1021 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 THOC1Q96FV9 657 aaKnown RBP12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 ANKRD36BP1Q96IX9 119 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 MPHOSPH6Q99547 160 aaKnown RBP12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 GPR20Q99678 358 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 EPN3Q9H201 632 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 RPF1Q9H9Y2 349 aaKnown RBP12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 POC1B-GALNT4F8VUJ3 575 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 OGTO15294 1046 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 SHOX2O60902 331 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 MAFO75444 373 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 RFC5P40937 340 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 LRIG3Q6UXM1 1119 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 CCDC91Q7Z6B0 441 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 ERO1BQ86YB8 467 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 RAPGEF5Q92565 580 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 HSPH1Q92598 858 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 TBC1D31Q96DN5 1066 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 CDCA5Q96FF9 252 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 RBPJLQ9UBG7 517 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 ATAD5Q96QE3 1844 aa12.22□□□□□ -0.45
ARHGEF1-220ENST00000600274 SGK1O00141 431 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 NFICP08651 508 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 INSRRP14616 1297 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 CREB1P16220 341 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 TBXAS1P24557 533 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 PSMA2P25787 234 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 QPCTQ16769 361 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 MFSD7Q6UXD7 560 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 MON1BQ7L1V2 547 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 SESTD1Q86VW0 696 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 BRSK2Q8IWQ3 736 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 ANKRD13AQ8IZ07 590 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 FEZF2Q8TBJ5 459 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 LRRN4Q8WUT4 740 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 NIF3L1Q9GZT8 377 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 ATP2A1O14983 1001 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 MSCO60682 206 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 RGS7P49802 495 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 RTP1P59025 263 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 SKOR1P84550 965 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 AMHR2Q16671 573 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 P3H1Q32P28 736 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 GLRA4Q5JXX5 417 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 IER5Q5VY09 327 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 IZUMO3Q5VZ72 239 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 DENND1BQ6P3S1 775 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 MICALCLQ6ZW33 695 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 GLIS1Q8NBF1 620 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 TMEM35BQ8NCS4 154 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 AFG1LQ8WV93 481 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 KAT2BQ92831 832 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 MYCBPQ99417 103 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 ACO2Q99798 780 aaKnown RBP12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 CALN1Q9BXU9 219 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 INTS9Q9NV88 658 aaKnown RBP12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 PARVAQ9NVD7 372 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 PARP2Q9UGN5 583 aa12.21□□□□□ -0.45
ARHGEF1-220ENST00000600274 CNTNAP2Q9UHC6 1331 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 PPFIA2O75334 1257 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 PSMC1P62191 440 aaKnown RBP12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 CENPCQ03188 943 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 ZNF667Q5HYK9 610 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 SCYL2Q6P3W7 929 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 C15orf39Q6ZRI6 1047 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 PNMA8AQ86V59 439 aaPredicted RBP12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 CCDC33Q8N5R6 958 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 SLC10A4Q96EP9 437 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 TRIM11Q96F44 468 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 HEXIM2Q96MH2 286 aaKnown RBP12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 SMYD3Q9H7B4 428 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 HMGXB4Q9UGU5 601 aa12.21□□□□□ -0.46
ARHGEF1-220ENST00000600274 SSC5DA1L4H1 1573 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 GMNCA6NCL1 334 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 RIPK2O43353 540 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms