RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 HMGXB4Q9UGU5 601 aa15.4■□□□□ 0.06
VRK3-217ENST00000599538 TRIP11Q15643 1979 aa15.39■□□□□ 0.05
VRK3-217ENST00000599538 PROSCO94903 275 aa15.39■□□□□ 0.05
VRK3-217ENST00000599538 UAP1Q16222 522 aaPredicted RBP15.39■□□□□ 0.05
VRK3-217ENST00000599538 DUPD1Q68J44 220 aa15.39■□□□□ 0.05
VRK3-217ENST00000599538 IQSEC1Q6DN90 963 aa15.39■□□□□ 0.05
VRK3-217ENST00000599538 ILDR2Q71H61 639 aa15.39■□□□□ 0.05
VRK3-217ENST00000599538 MREGQ8N565 214 aa15.39■□□□□ 0.05
VRK3-217ENST00000599538 DDX27Q96GQ7 796 aaKnown RBP15.39■□□□□ 0.05
VRK3-217ENST00000599538 TWNKQ96RR1 684 aa15.39■□□□□ 0.05
VRK3-217ENST00000599538 FAM49AQ9H0Q0 323 aaPredicted RBP15.39■□□□□ 0.05
VRK3-217ENST00000599538 SMYD3Q9H7B4 428 aa15.39■□□□□ 0.05
VRK3-217ENST00000599538 TJP2Q9UDY2 1190 aa15.39■□□□□ 0.05
VRK3-217ENST00000599538 UTP11Q9Y3A2 253 aaKnown RBP15.39■□□□□ 0.05
VRK3-217ENST00000599538 SLC15A5A6NIM6 579 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 TLR3O15455 904 aaKnown RBP15.38■□□□□ 0.05
VRK3-217ENST00000599538 ZEB2O60315 1214 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 HSF2BPO75031 334 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 IL18RAPO95256 599 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 TCF4P15884 667 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 HSPA9P38646 679 aaKnown RBP15.38■□□□□ 0.05
VRK3-217ENST00000599538 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
VRK3-217ENST00000599538 TTMPQ5BVD1 217 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 MORN1Q5T089 497 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 LIN9Q5TKA1 542 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 OLFML2BQ68BL8 750 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 ANKS1BQ7Z6G8 1248 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 KAT2BQ92831 832 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 ERP44Q9BS26 406 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 TCRBV5S1A1TA0A578 114 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 ERICH4A6NGS2 130 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 LMAN1P49257 510 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 ZNF252P-AS1Q0IIN9 211 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 ALS2CLQ60I27 953 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 DENND1BQ6P3S1 775 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 CCDC137Q6PK04 289 aaKnown RBP15.38■□□□□ 0.05
VRK3-217ENST00000599538 EIF1ADQ8N9N8 165 aaKnown RBP15.38■□□□□ 0.05
VRK3-217ENST00000599538 C1orf54Q8WWF1 131 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 EXOC4Q96A65 974 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 VCPIP1Q96JH7 1222 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 BCO2Q9BYV7 579 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 RNF19AQ9NV58 838 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 CYTH4Q9UIA0 394 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 GNEQ9Y223 722 aaKnown RBP15.38■□□□□ 0.05
VRK3-217ENST00000599538 USTQ9Y2C2 406 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 SNX24Q9Y343 169 aa15.38■□□□□ 0.05
VRK3-217ENST00000599538 A0A1B0GUA9 196 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 HSD17B3P37058 310 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 OGDHQ02218 1023 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 ATP13A4Q4VNC1 1196 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 ZNF667Q5HYK9 610 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 CFAP58Q5T655 872 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 CYP4A22Q5TCH4 519 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 OR2W6PQ8NHA6 318 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 PTPN22Q9Y2R2 807 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 CITO14578 2027 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 A6NJR5 290 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 FSCN2O14926 492 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 ERLIN2O94905 339 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 CD19P15391 556 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 POLR2BP30876 1174 aaKnown RBP15.37■□□□□ 0.05
VRK3-217ENST00000599538 CHRNA3P32297 505 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 GJC1P36383 396 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 RAD23BP54727 409 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 MAP2K5Q13163 448 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 CYP1B1Q16678 543 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 RUFY4Q6ZNE9 571 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 FEZF2Q8TBJ5 459 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 ATG4AQ8WYN0 398 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 ADAMTS10Q9H324 1103 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 CHST7Q9NS84 486 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 ZDHHC18Q9NUE0 388 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 PCYOX1Q9UHG3 505 aa15.37■□□□□ 0.05
VRK3-217ENST00000599538 TRIP12Q14669 1992 aaPredicted RBP15.37■□□□□ 0.05
VRK3-217ENST00000599538 ZNF865P0CJ78 1059 aaPredicted RBP15.36■□□□□ 0.05
VRK3-217ENST00000599538 SMIM10L2AP0DMW4 78 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 SMIM10L2BP0DMW5 78 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 HSPA6P17066 643 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 HOXA11P31270 313 aaPredicted RBP15.36■□□□□ 0.05
VRK3-217ENST00000599538 COILP38432 576 aaPredicted RBP15.36■□□□□ 0.05
VRK3-217ENST00000599538 SLC1A1P43005 524 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 LACTBP83111 547 aaPredicted RBP15.36■□□□□ 0.05
VRK3-217ENST00000599538 SNX1Q13596 522 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 DHX34Q14147 1143 aaKnown RBP15.36■□□□□ 0.05
VRK3-217ENST00000599538 ZDHHC24Q6UX98 284 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 RASAL3Q86YV0 1011 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 SH2D3CQ8N5H7 860 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 MCEEQ96PE7 176 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 HEMGNQ9BXL5 484 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 ELOVL4Q9GZR5 314 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 RAB17Q9H0T7 212 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 MRPL47Q9HD33 250 aaKnown RBP15.36■□□□□ 0.05
VRK3-217ENST00000599538 PARVAQ9NVD7 372 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 KLHL11Q9NVR0 708 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 GRHL1Q9NZI5 618 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 PLAAQ9Y263 795 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 HES2Q9Y543 173 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 CEP350Q5VT06 3117 aa15.36■□□□□ 0.05
VRK3-217ENST00000599538 FAM187AA6NFU0 413 aa15.35■□□□□ 0.05
VRK3-217ENST00000599538 TMEM191CA6NGB0 347 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms