RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PABPC1LQ4VXU2 614 aaKnown RBP15.26■□□□□ 0.03
LIG1-218ENST00000599322 IER5LQ5T953 404 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 CYP4A22Q5TCH4 519 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 RSPO2Q6UXX9 243 aaPredicted RBP15.26■□□□□ 0.03
LIG1-218ENST00000599322 TCEAL8Q8IYN2 117 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 XXYLT1Q8NBI6 393 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 PRSS33Q8NF86 280 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 PBXIP1Q96AQ6 731 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 ITGA11Q9UKX5 1188 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 AGAP1Q9UPQ3 857 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 ZDBF2Q9HCK1 2354 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 WDR27A2RRH5 827 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 TBC1D4O60343 1298 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 EXOC3O60645 756 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 PAPLNO95428 1278 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 ITGB3P05106 788 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 TNNI1P19237 187 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 CASP1P29466 404 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 ALDH1A3P47895 512 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 CYP2J2P51589 502 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 NDUFA8P51970 172 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 ADCY1Q08828 1119 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 SMARCB1Q12824 385 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 TDGQ13569 410 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 EPM2AIP1Q7L775 607 aaPredicted RBP15.25■□□□□ 0.03
LIG1-218ENST00000599322 GRAMD1CQ8IYS0 662 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 LRRC52Q8N7C0 313 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 RDH13Q8NBN7 331 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 LEMD2Q8NC56 503 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 SCFD1Q8WVM8 642 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 PHOX2BQ99453 314 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 FGFBP2Q9BYJ0 223 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 PDE11AQ9HCR9 933 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 AGPAT3Q9NRZ7 376 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 HPSEQ9Y251 543 aa15.25■□□□□ 0.03
LIG1-218ENST00000599322 MRPS23Q9Y3D9 190 aaKnown RBP15.25■□□□□ 0.03
LIG1-218ENST00000599322 CLIC2O15247 247 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 CLSTN1O94985 981 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 RPN1P04843 607 aaKnown RBP15.24■□□□□ 0.03
LIG1-218ENST00000599322 LAMP2P13473 410 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 RFX1P22670 979 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 POLR2BP30876 1174 aaKnown RBP15.24■□□□□ 0.03
LIG1-218ENST00000599322 EPHB3P54753 998 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 BFSP1Q12934 665 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 GPR17Q13304 367 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 TAF12Q16514 161 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 SNRNP35Q16560 246 aaKnown RBP15.24■□□□□ 0.03
LIG1-218ENST00000599322 BMT2Q1RMZ1 405 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 KMT5BQ4FZB7 885 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 KRBA2Q6ZNG9 492 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 MTSS1LQ765P7 747 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 EFCAB13Q8IY85 973 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 DCP1BQ8IZD4 617 aaKnown RBP15.24■□□□□ 0.03
LIG1-218ENST00000599322 GLIS3Q8NEA6 775 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 ASIC4Q96FT7 647 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 MFSD1Q9H3U5 465 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 KCNK12Q9HB15 430 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 EPS15L1Q9UBC2 864 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 FBXL21Q9UKT6 434 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 CDH7Q9ULB5 785 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 INSL5Q9Y5Q6 135 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 PLXNA3P51805 1871 aa15.24■□□□□ 0.03
LIG1-218ENST00000599322 MTCL1Q9Y4B5 1905 aaKnown RBP15.23■□□□□ 0.03
LIG1-218ENST00000599322 FAM237AA0A1B0GTK4 181 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 CALUO43852 315 aaPredicted RBP15.23■□□□□ 0.03
LIG1-218ENST00000599322 PHACTR2O75167 634 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 ZNF202O95125 648 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 CYP11A1P05108 521 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 ASGR2P07307 311 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 DLATP10515 647 aaKnown RBP15.23■□□□□ 0.03
LIG1-218ENST00000599322 TUFMP49411 452 aaKnown RBP15.23■□□□□ 0.03
LIG1-218ENST00000599322 MYL7Q01449 175 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 TSPY1Q01534 308 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 EHHADHQ08426 723 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 TRPC3Q13507 836 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 VEPH1Q14D04 833 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 PDZD4Q76G19 769 aaPredicted RBP15.23■□□□□ 0.03
LIG1-218ENST00000599322 WDR49Q8IV35 697 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 TMEM86AQ8N2M4 240 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 C2orf15Q8WU43 125 aaKnown RBP15.23■□□□□ 0.03
LIG1-218ENST00000599322 CORO1BQ9BR76 489 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 GDPD2Q9HCC8 539 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 INTS13Q9NVM9 706 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 RMND1Q9NWS8 449 aa15.23■□□□□ 0.03
LIG1-218ENST00000599322 USP34Q70CQ2 3546 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 PPEF2O14830 753 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 SMC2O95347 1197 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 TWF1Q12792 350 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 RNF19BQ6ZMZ0 732 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 ITIH5Q86UX2 942 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 CBWD2Q8IUF1 395 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 C12orf56Q8IXR9 622 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 FBXL6Q8N531 539 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 FAM200AQ8TCP9 573 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 CCDC127Q96BQ5 260 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 PGLYRP2Q96PD5 576 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 MYADMQ96S97 322 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 GTPBP4Q9BZE4 634 aaKnown RBP15.22■□□□□ 0.03
LIG1-218ENST00000599322 MTMR12Q9C0I1 747 aa15.22■□□□□ 0.03
LIG1-218ENST00000599322 ASAH2Q9NR71 780 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms