RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	GPBP1	Q86WP2	473 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MFSD6L	Q8IWD5	586 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TTC8	Q8TAM2	541 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	FAM3C	Q92520	227 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	BORCS6	Q96GS4	357 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SENP8	Q96LD8	212 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	EPC1	Q9H2F5	836 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ASAH2	Q9NR71	780 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	RBM12	Q9NTZ6	932 aa	Known RBP	11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MAFF	Q9ULX9	164 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	UBQLN1	Q9UMX0	589 aa	Known RBP	11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PIAS3	Q9Y6X2	628 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PATJ	Q8NI35	1801 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MIA3	Q5JRA6	1907 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CIT	O14578	2027 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ANO9	A1A5B4	782 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PLCG1	P19174	1290 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CCNE1	P24864	410 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MAGEA9	P43362	315 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ACOT2	P49753	483 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	WNT7B	P56706	349 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SATB1	Q01826	763 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	KARS	Q15046	597 aa	Known RBP	11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	C9orf57	Q5W0N0	161 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	IQCE	Q6IPM2	695 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DGLUCY	Q7Z3D6	616 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	KCTD17	Q8N5Z5	321 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MYCT1	Q8N699	235 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZSWIM2	Q8NEG5	633 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ATRIP	Q8WXE1	791 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	IRF7	Q92985	503 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZFYVE19	Q96K21	471 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	FAM84A	Q96KN4	292 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	HINFP	Q9BQA5	517 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	IL21	Q9HBE4	155 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	KCND2	Q9NZV8	630 aa		11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SMG5	Q9UPR3	1016 aa	Known RBP	11.98	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SDK1	Q7Z5N4	2213 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	OR6C75	A6NL08	312 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MAN2B1	O00754	1011 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	OGT	O15294	1046 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	HR	O43593	1189 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	EIF5B	O60841	1220 aa	Known RBP	11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PRAMEF12	O95522	483 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ATF6	P18850	670 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TYMP	P19971	482 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MATR3	P43243	847 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	LIG4	P49917	911 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	GTF2B	Q00403	316 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	KCNA1	Q09470	495 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	FCHO2	Q0JRZ9	810 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SRSF5	Q13243	272 aa	Known RBP	11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	RABEP1	Q15276	862 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	LPAL2	Q16609	132 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	OVOS1	Q6IE37	1185 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DSTYK	Q6XUX3	929 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580		Q6ZS52	159 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TMEM150A	Q86TG1	271 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	RAD54L	Q92698	747 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	FAM212A	Q96EL1	285 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	BICD1	Q96G01	975 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	LPIN3	Q9BQK8	851 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SMG9	Q9H0W8	520 aa	Known RBP	11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	LARS	Q9P2J5	1176 aa	Known RBP	11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ODF2L	Q9ULJ1	636 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MRPS17	Q9Y2R5	130 aa	Known RBP	11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	STYXL1	Q9Y6J8	313 aa		11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PDCD11	Q14690	1871 aa	Known RBP	11.97	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SLC38A8	A6NNN8	435 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580		K7ENM7	598 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580		K7ESF4	209 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZNF263	O14978	683 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	HNRNPDL	O14979	420 aa	Known RBP	11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	NCAM2	O15394	837 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TRAK2	O60296	914 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ADSS	P30520	456 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ATXN1	P54253	815 aa	Known RBP	11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	EPHB3	P54753	998 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PPP2R3A	Q06190	1150 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TNK2	Q07912	1038 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MYBPC2	Q14324	1141 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	EFCAB13	Q8IY85	973 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ELMOD1	Q8N336	334 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	RIN3	Q8TB24	985 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DEPDC1B	Q8WUY9	529 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PSMG2	Q969U7	264 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CHFR	Q96EP1	664 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	EPSTI1	Q96J88	318 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MSTO1	Q9BUK6	570 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	STRA6	Q9BX79	667 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SLC46A2	Q9BY10	475 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZCWPW1	Q9H0M4	648 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	RPF1	Q9H9Y2	349 aa	Known RBP	11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TMLHE	Q9NVH6	421 aa		11.96	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	GTSE1	Q9NYZ3	720 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms