RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 UBA7P41226 1012 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZNF131P52739 623 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 MTAPQ13126 283 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZNF528Q3MIS6 628 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZC2HC1CQ53FD0 456 aaPredicted RBP13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZNF852Q6ZMS4 543 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 ATAD1Q8NBU5 361 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 OR10T2Q8NGX3 314 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 RUBCNQ92622 972 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 RAD54LQ92698 747 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 CALML4Q96GE6 196 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 MSTO1Q9BUK6 570 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 SLITRK6Q9H5Y7 841 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 PARVGQ9HBI0 331 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 PRMT8Q9NR22 394 aaPredicted RBP13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 CPSF3Q9UKF6 684 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 SMC3Q9UQE7 1217 aa13.14□□□□□ -0.31
SOX2-OT-228ENST00000597828 SDK1Q7Z5N4 2213 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 A0A0B4J269 797 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 HEPACAM2A8MVW5 462 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 H0YCG3 227 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 ARNTLO00327 626 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 TRAK2O60296 914 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 MICAL2O94851 1124 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 KRT18P05783 430 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 ADRB2P07550 413 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 PSMC3P17980 439 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 MAGEA9P43362 315 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 SOX9P48436 509 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 ACOT2P49753 483 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 GPR17Q13304 367 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 WDR44Q5JSH3 913 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 SPATA1Q5VX52 437 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 OVOS1Q6IE37 1185 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 CENPPQ6IPU0 288 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 USP49Q70CQ1 688 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 USP37Q86T82 979 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 MAP4K3Q8IVH8 894 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 KCTD17Q8N5Z5 321 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 RASSF8Q8NHQ8 419 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 KCNN1Q92952 543 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 SENP8Q96LD8 212 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 AK8Q96MA6 479 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 LPIN3Q9BQK8 851 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 MKNK1Q9BUB5 465 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 PIAS3Q9Y6X2 628 aa13.13□□□□□ -0.31
SOX2-OT-228ENST00000597828 MED19A0JLT2 244 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 OR6C75A6NL08 312 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 SLC38A8A6NNN8 435 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 XPOTO43592 962 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 ODC1P11926 461 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 TDGF1P13385 188 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 RPS9P46781 194 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 LILRA4P59901 499 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 C9orf57Q5W0N0 161 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 LARP1BQ659C4 914 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 GAREM2Q75VX8 874 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 ERMP1Q7Z2K6 904 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 EFCAB13Q8IY85 973 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 FAM3CQ92520 227 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 LARP4BQ92615 738 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 NELL1Q92832 810 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 IRF7Q92985 503 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZFYVE19Q96K21 471 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 CHRDQ9H2X0 955 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 NCDNQ9UBB6 729 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 KCNG1Q9UIX4 513 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 SMG5Q9UPR3 1016 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 MRPS17Q9Y2R5 130 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 PCDHGA2Q9Y5H1 932 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 THADAQ6YHU6 1953 aa13.12□□□□□ -0.31
SOX2-OT-228ENST00000597828 PIRO00625 290 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZNF263O14978 683 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 NCAM2O15394 837 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 LILRB5O75023 590 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 TBCAO75347 108 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 ATF6P18850 670 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 TYMPP19971 482 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 CCNE1P24864 410 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 GABRR2P28476 465 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 HOXC13P31276 330 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 EPHB3P54753 998 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 WNT7BP56706 349 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 CYP4F8P98187 520 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 GTF2BQ00403 316 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 PLD1Q13393 1074 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 GAS6Q14393 721 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 TMEM132DQ14C87 1099 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 DYMQ7RTS9 669 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 MFSD6LQ8IWD5 586 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 LEMD2Q8NC56 503 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 STKLD1Q8NE28 680 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZSWIM2Q8NEG5 633 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 ATRIPQ8WXE1 791 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 EPSTI1Q96J88 318 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms