RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 GPR158Q5T848 1215 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 TCEAL6Q6IPX3 200 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 CAMKK1Q8N5S9 505 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 ERMNQ8TAM6 284 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 BPIFB1Q8TDL5 484 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 TCEAL3Q969E4 200 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 C18orf25Q96B23 403 aaPredicted RBP11.07□□□□□ -0.64
TRIM28-210ENST00000597618 TBC1D32Q96NH3 1257 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 LRRC3BQ96PB8 259 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 PGLYRP2Q96PD5 576 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 MKNK1Q9BUB5 465 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 MRPL4Q9BYD3 311 aaKnown RBP11.07□□□□□ -0.64
TRIM28-210ENST00000597618 TM6SF1Q9BZW5 370 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 DNAJC25Q9H1X3 360 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 ATXN3LQ9H3M9 355 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 PTPRHQ9HD43 1115 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 THG1LQ9NWX6 298 aaKnown RBP11.07□□□□□ -0.64
TRIM28-210ENST00000597618 ASB3Q9Y575 518 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
TRIM28-210ENST00000597618 PDCD11Q14690 1871 aaKnown RBP11.06□□□□□ -0.64
TRIM28-210ENST00000597618 OR6C75A6NL08 312 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 C4orf47A7E2U8 309 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 GIPC1O14908 333 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 RHOBTB1O94844 696 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 OAZ2O95190 189 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 PRAMEF12O95522 483 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 RPA1P27694 616 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 MCM2P49736 904 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 TMEM196Q5HYL7 178 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 SH3PXD2AQ5TCZ1 1133 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 PKN3Q6P5Z2 889 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 ITIH5Q86UX2 942 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 GPIHBP1Q8IV16 184 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 PSMG2Q969U7 264 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 ACO2Q99798 780 aaKnown RBP11.06□□□□□ -0.64
TRIM28-210ENST00000597618 TMEM121BQ9BXQ6 578 aaPredicted RBP11.06□□□□□ -0.64
TRIM28-210ENST00000597618 PDRG1Q9NUG6 133 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 ORC3Q9UBD5 711 aaPredicted RBP11.06□□□□□ -0.64
TRIM28-210ENST00000597618 WASF3Q9UPY6 502 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 ITPR1Q14643 2758 aa11.06□□□□□ -0.64
TRIM28-210ENST00000597618 NBEAQ8NFP9 2946 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 M0QZQ0 153 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 WNT7AO00755 349 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 EPB41L2O43491 1005 aaKnown RBP11.05□□□□□ -0.64
TRIM28-210ENST00000597618 VNN2O95498 520 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 CAVIN2O95810 425 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 OR4Q2P0C623 313 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 CEACAM1P13688 526 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 MUTP22033 750 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 GABRR2P28476 465 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 AMPD2Q01433 879 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
TRIM28-210ENST00000597618 CREB5Q02930 508 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 DUSP4Q13115 394 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 GPR17Q13304 367 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 HAUS3Q68CZ6 603 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 FSTL4Q6MZW2 842 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 GAREM2Q75VX8 874 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 CENPQQ7L2Z9 268 aaPredicted RBP11.05□□□□□ -0.64
TRIM28-210ENST00000597618 USP37Q86T82 979 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 GATA6Q92908 595 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 GCNAQ96QF7 691 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 TCHPQ9BT92 498 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 DUSP15Q9H1R2 295 aaPredicted RBP11.05□□□□□ -0.64
TRIM28-210ENST00000597618 TMEM60Q9H2L4 133 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 CRISPLD1Q9H336 500 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 TASP1Q9H6P5 420 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
TRIM28-210ENST00000597618 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.05□□□□□ -0.64
TRIM28-210ENST00000597618 LNP1A1A4G5 178 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 BCLAF3A2AJT9 711 aaKnown RBP11.04□□□□□ -0.64
TRIM28-210ENST00000597618 SRRM3A6NNA2 597 aaPredicted RBP11.04□□□□□ -0.64
TRIM28-210ENST00000597618 CCDC169A6NNP5 214 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 SOBPA7XYQ1 873 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 TRDMT1O14717 391 aaKnown RBP11.04□□□□□ -0.64
TRIM28-210ENST00000597618 PFKFB2O60825 505 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 RNF40O75150 1001 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 APBB3O95704 486 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 SPINK2P20155 84 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 CSRP1P21291 193 aaKnown RBP11.04□□□□□ -0.64
TRIM28-210ENST00000597618 PROZP22891 400 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 CDC25CP30307 473 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 DMP1Q13316 513 aaPredicted RBP11.04□□□□□ -0.64
TRIM28-210ENST00000597618 MYBPC2Q14324 1141 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 CENPPQ6IPU0 288 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 DNAJB7Q7Z6W7 309 aaPredicted RBP11.04□□□□□ -0.64
TRIM28-210ENST00000597618 C11orf74Q86VG3 221 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 DIS3L2Q8IYB7 885 aaKnown RBP11.04□□□□□ -0.64
TRIM28-210ENST00000597618 ZCCHC14Q8WYQ9 949 aaKnown RBP11.04□□□□□ -0.64
TRIM28-210ENST00000597618 EXOC4Q96A65 974 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 HHIPQ96QV1 700 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 TARS2Q9BW92 718 aaKnown RBP11.04□□□□□ -0.64
TRIM28-210ENST00000597618 BHMT2Q9H2M3 363 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 TMEM9BQ9NQ34 198 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 HSFX1Q9UBD0 423 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 TUBGCP4Q9UGJ1 667 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 ZMYM5Q9UJ78 669 aa11.04□□□□□ -0.64
TRIM28-210ENST00000597618 SMG1Q96Q15 3661 aaKnown RBP11.03□□□□□ -0.64
TRIM28-210ENST00000597618 LOC400499M0QZD8 3231 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms