RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 ANK1P16157 1881 aa17.3■□□□□ 0.36
LINC02560-201ENST00000596379 MED19A0JLT2 244 aaPredicted RBP17.29■□□□□ 0.36
LINC02560-201ENST00000596379 K7ENM7 598 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 FAM13AO94988 1023 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 ADRB2P07550 413 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 TYMPP19971 482 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 UBA7P41226 1012 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 ALDH1A3P47895 512 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 LILRA4P59901 499 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 RSPO4Q2I0M5 234 aaPredicted RBP17.29■□□□□ 0.36
LINC02560-201ENST00000596379 SPATA1Q5VX52 437 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 CENPPQ6IPU0 288 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 GPIHBP1Q8IV16 184 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 ATAD1Q8NBU5 361 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 E2F7Q96AV8 911 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 RSPRY1Q96DX4 576 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 SENP8Q96LD8 212 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 TSPAN18Q96SJ8 248 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 FAM126AQ9BYI3 521 aaPredicted RBP17.29■□□□□ 0.36
LINC02560-201ENST00000596379 EPC1Q9H2F5 836 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 BLOC1S4Q9NUP1 217 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 DLL3Q9NYJ7 618 aa17.29■□□□□ 0.36
LINC02560-201ENST00000596379 SMG5Q9UPR3 1016 aaKnown RBP17.29■□□□□ 0.36
LINC02560-201ENST00000596379 DMXL1Q9Y485 3027 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 A0A0B4J269 797 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 SLC26A4O43511 780 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 TRAK2O60296 914 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 PIGRP01833 764 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 CCNE1P24864 410 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 ZNF131P52739 623 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 MYBPC2Q14324 1141 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 MCM6Q14566 821 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 JADE1Q6IE81 842 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 MAMSTRQ6ZN01 415 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 CD302Q8IX05 232 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 YAF2Q8IY57 180 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 SECISBP2LQ93073 1101 aaKnown RBP17.28■□□□□ 0.36
LINC02560-201ENST00000596379 TMEM209Q96SK2 561 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 MSTO1Q9BUK6 570 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 ZHX3Q9H4I2 956 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 PARVGQ9HBI0 331 aa17.28■□□□□ 0.36
LINC02560-201ENST00000596379 CPSF3Q9UKF6 684 aaKnown RBP17.28■□□□□ 0.36
LINC02560-201ENST00000596379 MTMR11A4FU01 709 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 ARNTLO00327 626 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 SOAT2O75908 522 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.36
LINC02560-201ENST00000596379 KRT18P05783 430 aaKnown RBP17.27■□□□□ 0.36
LINC02560-201ENST00000596379 CHRNB1P11230 501 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 TDGF1P13385 188 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 SCP2P22307 547 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 STXBP5Q5T5C0 1151 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 C9orf57Q5W0N0 161 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 ARMCX5Q6P1M9 558 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 SLC39A4Q6P5W5 647 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 DNAJB7Q7Z6W7 309 aaPredicted RBP17.27■□□□□ 0.36
LINC02560-201ENST00000596379 ARID3BQ8IVW6 561 aaPredicted RBP17.27■□□□□ 0.36
LINC02560-201ENST00000596379 GPR161Q8N6U8 529 aaKnown RBP17.27■□□□□ 0.36
LINC02560-201ENST00000596379 CSGALNACT1Q8TDX6 532 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 ASB3Q9Y575 518 aa17.27■□□□□ 0.36
LINC02560-201ENST00000596379 SCN1AP35498 2009 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 DNAH14Q0VDD8 3507 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 ANKRD63C9JTQ0 380 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 PIRO00625 290 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 CHADO15335 359 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 NFICP08651 508 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 ODC1P11926 461 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 PLCG1P19174 1290 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 NMT1P30419 496 aaKnown RBP17.26■□□□□ 0.35
LINC02560-201ENST00000596379 NRLP54845 237 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 MLLT6P55198 1093 aaPredicted RBP17.26■□□□□ 0.35
LINC02560-201ENST00000596379 GTF2BQ00403 316 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 GRIN1Q05586 938 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 PPP2R5DQ14738 602 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 KARSQ15046 597 aaKnown RBP17.26■□□□□ 0.35
LINC02560-201ENST00000596379 LARP1BQ659C4 914 aaKnown RBP17.26■□□□□ 0.35
LINC02560-201ENST00000596379 GAREM2Q75VX8 874 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 TTC9BQ8N6N2 239 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 RAD54LQ92698 747 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 PSMG2Q969U7 264 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 LRRC3BQ96PB8 259 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 FIZ1Q96SL8 496 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 IER2Q9BTL4 223 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 ATXN3LQ9H3M9 355 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 FRYLO94915 3013 aa17.26■□□□□ 0.35
LINC02560-201ENST00000596379 PAX3P23760 479 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 GABRR2P28476 465 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 CXCL12P48061 93 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 SOX9P48436 509 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 ACOT2P49753 483 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 CCR3P51677 355 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 CDR1P51861 262 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 KPNA1P52294 538 aaPredicted RBP17.25■□□□□ 0.35
LINC02560-201ENST00000596379 SATB1Q01826 763 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 FCHO2Q0JRZ9 810 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 TMEM132DQ14C87 1099 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 ZC2HC1CQ53FD0 456 aaPredicted RBP17.25■□□□□ 0.35
LINC02560-201ENST00000596379 OR10T2Q8NGX3 314 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 RASSF8Q8NHQ8 419 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 MKNK1Q9BUB5 465 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms