RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 BMP1P13497 986 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 TYMPP19971 482 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 PSMC2P35998 433 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 VAMP7P51809 220 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 CDR1P51861 262 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 CLDN10P78369 228 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 LRRC63Q05C16 580 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 SMAD4Q13485 552 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 BIRC3Q13489 604 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 RAB33AQ14088 237 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 AAK1Q2M2I8 961 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 TJAP1Q5JTD0 557 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 OVOS1Q6IE37 1185 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 TTI2Q6NXR4 508 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 TMC5Q6UXY8 1006 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 USP37Q86T82 979 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 LRRC52Q8N7C0 313 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 TRIML1Q8N9V2 468 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 KREMEN2Q8NCW0 462 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 TMC2Q8TDI7 906 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 HPDLQ96IR7 371 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 TMEM209Q96SK2 561 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 RTP3Q9BQQ7 232 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 DZANK1Q9NVP4 752 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 FBXW11Q9UKB1 542 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 L1RE1Q9UN81 338 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 USP15Q9Y4E8 981 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 SNX9Q9Y5X1 595 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 SPTBN5Q9NRC6 3674 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 CETN3O15182 167 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 MAPK13O15264 365 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 HCRTO43612 131 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 PHACTR2O75167 634 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 OAZ2O95190 189 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 VNN1O95497 513 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 CYP11A1P05108 521 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 EPB41P11171 864 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 PNPLA4P41247 253 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 MYL6P60660 151 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 PPP3CAQ08209 521 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 PAK1Q13153 545 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 SLC8B1Q6J4K2 584 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 OSTM1Q86WC4 334 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 OR10T2Q8NGX3 314 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 MED15Q96RN5 788 aa14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.83□□□□□ -0.04
SHKBP1-207ENST00000595631 VNN2O95498 520 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 KRT13P13646 458 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 CPB1P15086 417 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 HOXB8P17481 243 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 PPP1R2P41236 205 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 GCLMP48507 274 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 FKBP3Q00688 224 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 DPCR1Q3MIW9 517 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 INTS8Q75QN2 995 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 PDCL2Q8N4E4 241 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 PGLYRP2Q96PD5 576 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 XYLT2Q9H1B5 865 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 SFXN1Q9H9B4 322 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 POLIQ9UNA4 740 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 R3HCC1Q9Y3T6 440 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 MYH10P35580 1976 aa14.82□□□□□ -0.04
SHKBP1-207ENST00000595631 HUS1O60921 280 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 LRRN2O75325 713 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 ABLIM3O94929 683 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 CLSTN1O94985 981 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 SEC24AO95486 1093 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 C8AP07357 584 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 PAX3P23760 479 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 MYO1EQ12965 1108 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 TRPC3Q13507 836 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 NCOA4Q13772 614 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 SMAD2Q15796 467 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 CCDC142Q17RM4 750 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 SOWAHAQ2M3V2 549 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 ZACNQ401N2 412 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 RNF19BQ6ZMZ0 732 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 C15orf39Q6ZRI6 1047 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 SV2AQ7L0J3 742 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 METTL23Q86XA0 190 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 ZNF461Q8TAF7 563 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 SLC7A14Q8TBB6 771 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 ADAMTS19Q8TE59 1207 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 SUSD6Q92537 303 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 MKNK1Q9BUB5 465 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 ADAM7Q9H2U9 754 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 GDAP2Q9NXN4 497 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 DOCK8Q8NF50 2099 aa14.81□□□□□ -0.04
SHKBP1-207ENST00000595631 C5orf42Q9H799 3197 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 CCDC195A0A1B0GUA6 201 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 BICDL2A1A5D9 508 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 SLC16A3O15427 465 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 CCL16O15467 120 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 ZMYND10O75800 440 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 MBD3O95983 291 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 HLA-DRAP01903 254 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 ACAT1P24752 427 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 PIK3CAP42336 1068 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 AP3M2P53677 418 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 NLRP12P59046 1061 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms