RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 PTPRDP23468 1912 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 HELZP42694 1942 aaKnown RBP11.6□□□□□ -0.55
USE1-203ENST00000593597 LAMA1P25391 3075 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 HEPACAM2A8MVW5 462 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 K7ENM7 598 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 OGTO15294 1046 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 EIF5BO60841 1220 aaKnown RBP11.59□□□□□ -0.55
USE1-203ENST00000593597 PRAMEF12O95522 483 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 CHRNB1P11230 501 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 PSMC3P17980 439 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 PLCG1P19174 1290 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 NMT1P30419 496 aaKnown RBP11.59□□□□□ -0.55
USE1-203ENST00000593597 SMTNP53814 917 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 PPP2R3AQ06190 1150 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 DMWDQ09019 674 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 GPR17Q13304 367 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 DHX8Q14562 1220 aaKnown RBP11.59□□□□□ -0.55
USE1-203ENST00000593597 KARSQ15046 597 aaKnown RBP11.59□□□□□ -0.55
USE1-203ENST00000593597 RABEP1Q15276 862 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 ARL6IP4Q66PJ3 421 aaKnown RBP11.59□□□□□ -0.55
USE1-203ENST00000593597 TXNDC11Q6PKC3 985 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 USP49Q70CQ1 688 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 ATAD1Q8NBU5 361 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 ZNF512Q96ME7 567 aaPredicted RBP11.59□□□□□ -0.55
USE1-203ENST00000593597 TRPV5Q9NQA5 729 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 ASAH2Q9NR71 780 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 RBM12Q9NTZ6 932 aaKnown RBP11.59□□□□□ -0.55
USE1-203ENST00000593597 ZSCAN32Q9NX65 697 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 ODF2LQ9ULJ1 636 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 MAFFQ9ULX9 164 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 SMG5Q9UPR3 1016 aaKnown RBP11.59□□□□□ -0.55
USE1-203ENST00000593597 SLC27A5Q9Y2P5 690 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 PIAS3Q9Y6X2 628 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 EPG5Q9HCE0 2579 aa11.59□□□□□ -0.55
USE1-203ENST00000593597 SPAG17Q6Q759 2223 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 ANO9A1A5B4 782 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 PIRO00625 290 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 HNRNPDLO14979 420 aaKnown RBP11.58□□□□□ -0.56
USE1-203ENST00000593597 ATF6P18850 670 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 TYMPP19971 482 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 MATR3P43243 847 aaKnown RBP eCLIP11.58□□□□□ -0.56
USE1-203ENST00000593597 LIG4P49917 911 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 LILRA4P59901 499 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 SATB1Q01826 763 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 FCHO2Q0JRZ9 810 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 ZC2HC1CQ53FD0 456 aaPredicted RBP11.58□□□□□ -0.56
USE1-203ENST00000593597 CYP4A22Q5TCH4 519 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 C9orf57Q5W0N0 161 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 IQCEQ6IPM2 695 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 CRELD2Q6UXH1 353 aaPredicted RBP11.58□□□□□ -0.56
USE1-203ENST00000593597 Q6ZS52 159 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 MFSD6LQ8IWD5 586 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 EFCAB13Q8IY85 973 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 KCTD17Q8N5Z5 321 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 ZSWIM2Q8NEG5 633 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 DEPDC1BQ8WUY9 529 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 FAM3CQ92520 227 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 RAD54LQ92698 747 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 CHFRQ96EP1 664 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 BICD1Q96G01 975 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 BORCS6Q96GS4 357 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 ZFYVE19Q96K21 471 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 FAM84AQ96KN4 292 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 SENP8Q96LD8 212 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 NELL2Q99435 816 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 HINFPQ9BQA5 517 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 LPIN3Q9BQK8 851 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 IL21Q9HBE4 155 aa11.58□□□□□ -0.56
USE1-203ENST00000593597 LARSQ9P2J5 1176 aaKnown RBP11.58□□□□□ -0.56
USE1-203ENST00000593597 OR6C75A6NL08 312 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 SLC38A8A6NNN8 435 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 CYP11A1P05108 521 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 CCNE1P24864 410 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 MARCKSP29966 332 aaPredicted RBP11.57□□□□□ -0.56
USE1-203ENST00000593597 ACOT2P49753 483 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 GTF2BQ00403 316 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 MYBPC2Q14324 1141 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 RSPO4Q2I0M5 234 aaPredicted RBP11.57□□□□□ -0.56
USE1-203ENST00000593597 OVOS1Q6IE37 1185 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 DSTYKQ6XUX3 929 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 DGLUCYQ7Z3D6 616 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 LRRTM3Q86VH5 581 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 ELMOD1Q8N336 334 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 MYCT1Q8N699 235 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 LEMD2Q8NC56 503 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 STKLD1Q8NE28 680 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 RIN3Q8TB24 985 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 IRF7Q92985 503 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 PSMG2Q969U7 264 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 CDK5RAP3Q96JB5 506 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 MSTO1Q9BUK6 570 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 RPF1Q9H9Y2 349 aaKnown RBP11.57□□□□□ -0.56
USE1-203ENST00000593597 LMAN1LQ9HAT1 526 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 STYXL1Q9Y6J8 313 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 CHD8Q9HCK8 2581 aa11.57□□□□□ -0.56
USE1-203ENST00000593597 K7ESF4 209 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 MAN2B1O00754 1011 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 ZNF263O14978 683 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 TRAK2O60296 914 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 PPP1R37O75864 691 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms