RNA–Protein interactions for RNA: ENST00000593132.1

SEC11C-208, Transcript of SEC11 homolog C, signal peptidase complex subunit, human

TSL 3

Gene SEC11C, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC11C-208	ENST00000593132	SMRP1	Q8NCR6	262 aa		13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	OR5B17	Q8NGF7	314 aa		13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	C2orf15	Q8WU43	125 aa	Known RBP	13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	NELFB	Q8WX92	580 aa		13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	POP1	Q99575	1024 aa	Known RBP	13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	ADAM7	Q9H2U9	754 aa		13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	VRTN	Q9H8Y1	702 aa		13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	CLEC1B	Q9P126	229 aa		13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	HSFX1	Q9UBD0	423 aa		13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	PRKAG3	Q9UGI9	489 aa		13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	CDY1	Q9Y6F8	540 aa		13.71	□□□□□ -0.21
SEC11C-208	ENST00000593132	GRXCR2	A6NFK2	248 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	TGM5	O43548	720 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	TBC1D4	O60343	1298 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	PAPLN	O95428	1278 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	GLP2R	O95838	553 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	POU2F2	P09086	479 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	ATF2	P15336	505 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	PCSK1	P29120	753 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	MTHFR	P42898	656 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	CASP4	P49662	377 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	MYL7	Q01449	175 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	ZACN	Q401N2	412 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	KLHL10	Q6JEL2	608 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	LLGL2	Q6P1M3	1020 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	SASS6	Q6UVJ0	657 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	PALB2	Q86YC2	1186 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	DCP1B	Q8IZD4	617 aa	Known RBP	13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	KREMEN2	Q8NCW0	462 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	CXorf38	Q8TB03	319 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	BORCS6	Q96GS4	357 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	B3GALT6	Q96L58	329 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	SIX4	Q9UIU6	781 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	FBXL5	Q9UKA1	691 aa		13.7	□□□□□ -0.22
SEC11C-208	ENST00000593132	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132		I3L4J1	428 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	SPTLC1	O15269	473 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	LINC01565	O15544	149 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	XYLB	O75191	536 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	TBX10	O75333	385 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	ABLIM3	O94929	683 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	C4BPA	P04003	597 aa	Known RBP	13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	CCDC192	P0DO97	292 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	BMP6	P22004	513 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	WNT7B	P56706	349 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	NLRP12	P59046	1061 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	TNNC1	P63316	161 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	GPR17	Q13304	367 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	NCOA4	Q13772	614 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	MAPRE1	Q15691	268 aa	Known RBP	13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	SMAD2	Q15796	467 aa	Known RBP	13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	CCDC183	Q5T5S1	534 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	KRT39	Q6A163	491 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	TTI2	Q6NXR4	508 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	TTC39C	Q8N584	583 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	ACBD6	Q9BR61	282 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	TMEM8A	Q9HCN3	771 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	MAN1C1	Q9NR34	630 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	AFF4	Q9UHB7	1163 aa	Known RBP	13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132	SNX9	Q9Y5X1	595 aa		13.69	□□□□□ -0.22
SEC11C-208	ENST00000593132		H3BQ06	376 aa	Predicted RBP	13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	PMM2	O15305	246 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	N4BP1	O75113	896 aa	Known RBP	13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	TACC1	O75410	805 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	ZMYND10	O75800	440 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	CPB1	P15086	417 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	CD44	P16070	742 aa	Known RBP	13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	EPCAM	P16422	314 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	TSPY1	Q01534	308 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	PLD1	Q13393	1074 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	NFE2	Q16621	373 aa	Predicted RBP	13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	TPD52L1	Q16890	204 aa	Predicted RBP	13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	WDR72	Q3MJ13	1102 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	CCDC40	Q4G0X9	1142 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	ZNF667	Q5HYK9	610 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	RBM43	Q6ZSC3	357 aa	Known RBP	13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	SV2A	Q7L0J3	742 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	FAM114A1	Q8IWE2	563 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	TCEAL8	Q8IYN2	117 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	VN1R2	Q8NFZ6	395 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	GPT2	Q8TD30	523 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	ZNF516	Q92618	1163 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	MMS19	Q96T76	1030 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	S1PR5	Q9H228	398 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	FBXW11	Q9UKB1	542 aa		13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.68	□□□□□ -0.22
SEC11C-208	ENST00000593132	PDCD11	Q14690	1871 aa	Known RBP	13.67	□□□□□ -0.22
SEC11C-208	ENST00000593132	PTPRJ	Q12913	1337 aa		13.67	□□□□□ -0.22
SEC11C-208	ENST00000593132	COL6A3	P12111	3177 aa		13.67	□□□□□ -0.22
SEC11C-208	ENST00000593132	TRIP11	Q15643	1979 aa		13.67	□□□□□ -0.22
SEC11C-208	ENST00000593132	PRRG1	O14668	218 aa		13.67	□□□□□ -0.22
SEC11C-208	ENST00000593132	PPEF2	O14830	753 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms